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Protein Alignment Arpc2 and Scrn3
DIOPT Version :9
Sequence 1: | NP_001286102.1 |
Gene: | Arpc2 / 35311 |
FlyBaseID: | FBgn0032859 |
Length: | 301 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_006500376.1 |
Gene: | Scrn3 / 74616 |
MGIID: | 1921866 |
Length: | 441 |
Species: | Mus musculus |
Alignment Length: | 78 |
Identity: | 17/78 - (21%) |
Similarity: | 29/78 - (37%) |
Gaps: | 18/78 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 199 LFSHREPPLELANTDARVGDNI------------GYVTFVLFPRHTNKETRDNTINLIHMFRDYL 251
|:...:..||:.:.....|..| ..:..:|...|.::| .|:|| |..|:
Mouse 370 LYQKHQEALEMISNSKEKGKTILDKMRKLEKAVSEEIESILQSGHLDEE---KTVNL---FPQYV 428
Fly 252 HYHIKCSKAYIHS 264
...||..::.|.|
Mouse 429 KDEIKIYQSNISS 441
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Arpc2 | NP_001286102.1 |
P34-Arc |
57..284 |
CDD:397935 |
17/78 (22%) |
Scrn3 | XP_006500376.1 |
Ntn_hydrolase |
28..>247 |
CDD:382028 |
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG4690 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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