Protein Alignment Arpc2 and scrn2

DIOPT Version :10

• Sequence 1: NP_610033.1
• Gene: Arpc2 / 35311
• FlyBaseID: FBgn0032859
• Length: 301
• Species: Drosophila melanogaster
• Sequence 2: NP_001025287.1
• Gene: scrn2 / 558306
• ZFINID: ZDB-GENE-040724-75
• Length: 415
• Species: Danio rerio
• Alignment Length: 258
• Identity: 44/258 - (17%)
• Similarity: 80/258 - (31%)
• Gaps: 88/258 - (34%)

  Fly    50 GDKTKVRISISLKFYKQLQEHGA----DELLKREYGSLLTDTEEGYNVSVLINL---EEIPEDCE 107
            ||..:..:::.....:|..:.||    .|........||.|.:|.:.:.....|   :::.|..:
Zfish   121 GDSARAALNVITALLEQFGQGGACRETSEPFSYHNTFLLVDRQEAWVLETAGKLWAAQKVTEGVK 185

  Fly   108 QIAKRIGLLKRNCFASVFEKYFDYQEQGEEGQKRAVINYRNDETLYVEAKPDRVTVVFSTIFRDE 172
            .|:.::.:              |::...|....|:|...:.                   .:..|
Zfish   186 NISNQLTI--------------DFEISAEHPDLRSVAQAQG-------------------WWSGE 217

  Fly   173 DDVIIGKVFMQELREGRRASHTAPQVLFSHREPP--LELANTDARVGDNIGYVTFVLFPRHTNKE 235
            .|.                |.||   :||...||  :|:|....|.|.       .|..:|....
Zfish   218 GDF----------------SFTA---VFSPDHPPARMEMAKQRYRGGT-------ALLQQHNGSV 256

  Fly   236 TRDNTINLIHMFRDYLHYHIKCSKAYIHSRMRAKTSDFLKVLNR-----------ARPEPKNT 287
            |.:..::::   ||      |.|...:.|.....|...:.:|.|           |.|:|..:
Zfish   257 TAEVMMSIL---RD------KASGICMDSEGFRTTGSMVSILPRNPNMPCVHFLTATPDPSRS 310

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Arpc2	NP_610033.1	P34-Arc	57..284	CDD:461144	41/246 (17%)
scrn2	NP_001025287.1	PepD	17..>229	CDD:477862	24/159 (15%)