DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10949 and CG42526

DIOPT Version :9

Sequence 1:NP_001286101.1 Gene:CG10949 / 35310 FlyBaseID:FBgn0032858 Length:459 Species:Drosophila melanogaster
Sequence 2:NP_001163401.1 Gene:CG42526 / 8674075 FlyBaseID:FBgn0260431 Length:245 Species:Drosophila melanogaster


Alignment Length:305 Identity:64/305 - (20%)
Similarity:109/305 - (35%) Gaps:86/305 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 LIELVKSHPVLYDRHKIRVSKNLAAKNEAWREISENLNVSEELCYNRWKKLRDRFGREFRSHQIN 205
            ||..||.:..:::::..|..     :.:||..:::....|.|.|..|||.||||:.||.:.....
  Fly     8 LIASVKRNVSIFEKYHTRYD-----RKQAWIAVAQACQKSVEYCQIRWKSLRDRYVRETQKPAAT 67

  Fly   206 QSTPITWRYFNDLLFLGRHFRKGVPLVLENIKRRGRPPKAGNPSGKTSKQPEGMVISSGEQIWGA 270
            :|   ..|.|.:|.||..|.|         |:|  :|.:..|..........|:.:.|       
  Fly    68 RS---NIRKFKELDFLREHIR---------IRR--KPNELCNTLNTNKTLVPGVTVDS------- 111

  Fly   271 DYPYSTDNDDLE---------DDLELAYDEEIEILSEAEQATPYDFILSEATARQDLEPPQQLQV 326
               .|.|...||         |:..:.|..|.|.|||.:.::. :||..::......|.|.    
  Fly   112 ---QSADELALERNGITEFQPDEFIIEYKGEEEYLSETDNSSA-EFISEDSACNIGSELPY---- 168

  Fly   327 TTTTPATSEEIIHTIARVNPVVEESSSLPGDSVPSAAISDKLLTTVIANMETVLQQSRELQAQIH 391
             .|.|:.:.|                   |.|...|.     ..:|:..:|:.|           
  Fly   169 -VTKPSFNGE-------------------GQSQTQAK-----FMSVMNLIESAL----------- 197

  Fly   392 HEQEQEREQRSTQPANSLLAKAQMLLDGLSPSERASAERKIVQFL 436
                   :.:..:|.:......:.:|.|:..|.|...:.|::.|:
  Fly   198 -------KDKPAEPQDPFYKYLESILTGVDDSTRIDIQLKVLNFV 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10949NP_001286101.1 MADF 5..91 CDD:214738
MADF 140..226 CDD:214738 26/84 (31%)
CG42526NP_001163401.1 MADF 8..85 CDD:214738 26/84 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1634040at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR12243
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.020

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