DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10949 and Amy-p

DIOPT Version :9

Sequence 1:NP_001286101.1 Gene:CG10949 / 35310 FlyBaseID:FBgn0032858 Length:459 Species:Drosophila melanogaster
Sequence 2:NP_001286518.1 Gene:Amy-p / 47764 FlyBaseID:FBgn0000079 Length:494 Species:Drosophila melanogaster


Alignment Length:71 Identity:21/71 - (29%)
Similarity:30/71 - (42%) Gaps:16/71 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 DAAWKAISQK----LGASERACITRWKSIRDRFGKEFR---RFQERPDEPTYWDMFP---RLLFL 86
            |...:|||:.    |||     ||.::. .|..||.||   :.|...:..|.|....   .|:|:
  Fly   244 DMGGEAISKSEYTGLGA-----ITEFRH-SDSIGKVFRGKDQLQYLTNWGTAWGFAASDRSLVFV 302

  Fly    87 KDHYKQ 92
            .:|..|
  Fly   303 DNHDNQ 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10949NP_001286101.1 MADF 5..91 CDD:214738 20/68 (29%)
MADF 140..226 CDD:214738
Amy-pNP_001286518.1 AmyAc_bac_euk_AmyA 28..399 CDD:200456 21/71 (30%)
Alpha-amylase 54..342 CDD:278554 21/71 (30%)
Aamy_C 405..493 CDD:214749
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0366
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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