DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10949 and madf-4

DIOPT Version :9

Sequence 1:NP_001286101.1 Gene:CG10949 / 35310 FlyBaseID:FBgn0032858 Length:459 Species:Drosophila melanogaster
Sequence 2:NP_505565.3 Gene:madf-4 / 179386 WormBaseID:WBGene00011575 Length:329 Species:Caenorhabditis elegans


Alignment Length:323 Identity:71/323 - (21%)
Similarity:122/323 - (37%) Gaps:98/323 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 RKDEEEEDSQDDLLNEQLIELVKSHPVLYDR----HKIRVSKNLAAKNEAWREISENLNVSEELC 184
            |.|....|..:|.....||:.|:.:|.:|:|    ||:     ...|:|.|:.|      |.|:.
 Worm     5 RADSPNHDPLEDDFTLALIDSVQRNPCVYNRYDPLHKV-----TDYKHEIWKLI------SIEIG 58

  Fly   185 YN--------RWKKLRDRFGREFRSHQINQSTPIT-----WRYFNDLLFLGRHFRKGVPLVLENI 236
            |:        :||.:||::.|  ...|..|..||.     :.|::.:.||..:...      .|.
 Worm    59 YDGQPVELERKWKHMRDKYVR--LRKQDKQKAPIKKTNKWYNYYHKMSFLDPYVEH------RNR 115

  Fly   237 KRRGRPPKAGNP-------------SGKTSKQPEGMVISSGEQIWGADYPYSTDND--------- 279
            ||:.....:..|             |.|...:||.::.|:..   |.:.|::|.:.         
 Worm   116 KRQKDYLNSNTPDFLDDDTAFLDGLSVKEMLKPESLLTSNDA---GYNSPHTTSSSSSSGSNNNG 177

  Fly   280 --------DLEDD---LELAYDEEIEILSEAEQATPY------DFILSEATARQDLEPPQQLQVT 327
                    |:|||   |.|.||:.:...:|.|:...:      |.:.|  |....:|   :|..|
 Worm   178 RFLDSPTIDIEDDKKNLALIYDKFVANQTENEKNHRFSNKHGKDLLFS--TTNTLIE---KLATT 237

  Fly   328 TTTPATSEEIIHTIARVNPVVEESSSLPGDSVPSAAISDKLLTTVIANMETVLQQSRELQAQI 390
            :|.|::|              .:...:|...:||:....: ..|.|..:|.:|.:..|.|..:
 Worm   238 STAPSSS--------------RKRKPIPVQILPSSPPPQE-KNTKIELLEDILNEPNEDQVSL 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10949NP_001286101.1 MADF 5..91 CDD:214738
MADF 140..226 CDD:214738 27/102 (26%)
madf-4NP_505565.3 MADF 22..111 CDD:214738 27/101 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm14087
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.