DRSC/TRiP Functional Genomics Resources

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Protein Alignment RtGEF and Arhgef7

DIOPT Version :10

Sequence 1:NP_001097184.2 Gene:RtGEF / 35306 FlyBaseID:FBgn0015803 Length:1310 Species:Drosophila melanogaster
Sequence 2:XP_036010059.1 Gene:Arhgef7 / 54126 MGIID:1860493 Length:919 Species:Mus musculus


Alignment Length:554 Identity:213/554 - (38%)
Similarity:317/554 - (57%) Gaps:77/554 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LVVQAEYSFMGSNNDELCFQKGDVITVTQREDGGWWEGTLNDKTGWFPSNYVNECKVQ----LPL 65
            |||:|:::|..:|.|||.|.|||||.||:.|:|||||||.|.:|||||||||.|.|..    .|.
Mouse   223 LVVRAKFNFQQTNEDELSFSKGDVIHVTRVEEGGWWEGTHNGRTGWFPSNYVREIKPSEKPVSPK 287

  Fly    66 TETIR-PPEEI------QEYRSVVLKDLLDSERAHVAELQGLLENFLEPMQQTQILSQDEYAQLM 123
            :.|:: ||:..      :.|.:|||:::|::|..:..|||.:|..:|.|:|.:..||....:.||
Mouse   288 SGTLKSPPKGFDTTAINKSYYNVVLQNILETEHEYSKELQSVLSTYLRPLQTSDKLSSANTSYLM 352

  Fly   124 CNFVEIVRTHEDLLIQIEEC------NDRVGKLFLTSAPLMKKVHQAYCAAHPKAIVILDKYKDE 182
            .|..||....:.|:..:|||      ..|||..||:..|.|:.::.||||.||.|:.:|.::.::
Mouse   353 GNLEEISSFQQVLVQSLEECTKSPEAQQRVGGCFLSLMPQMRTLYLAYCANHPSAVSVLTEHSED 417

  Fly   183 LEKYMERQGAATPGLLVLTTGLSKPFRRLDKYSAMLQELERHMESSHPDRGDTQRSVAVYKDIAA 247
            |.::||.:||::||:|||||||||||.|||||..:|:|||||||..||||.|.|:|:..:|:::|
Mouse   418 LGEFMETKGASSPGILVLTTGLSKPFMRLDKYPTLLKELERHMEDYHPDRQDIQKSMTAFKNLSA 482

  Fly   248 TCSATRRQKELELQVLTGPVRGWQGQELSTLGDIIHMGSVAV---GADHR-DRYFVLFPQTLLFL 308
            .|...|::||||||:||.|:|.|:|.::.|||.:.:|..|.:   |::.: :||.:|||..||.|
Mouse   483 QCQEVRKRKELELQILTEPIRSWEGDDIKTLGSVTYMSQVTIQCAGSEEKNERYLLLFPNLLLML 547

  Fly   309 SVSQRMSAFIYEGKLPLTGIIVNRLEDTDALKNAFEISSPLIDRIVAVCQGPNEANKWVELLNAN 373
            |.|.|||.|||:||||.||:.:.:|||::..:||||||..:|:||:..|....:.::|||.|.. 
Mouse   548 SASPRMSGFIYQGKLPTTGMTITKLEDSENHRNAFEISGSMIERILVSCTSQQDLHEWVEHLQK- 611

  Fly   374 NPSLPMGIKRQLSNLSNSSL------GHLNAAH----LSQHLDSRGYCTRFSLCAYYSSP-PCHV 427
                    :.:::::||.::      .|...:|    .|:|.||:....   ..||::.| |.|.
Mouse   612 --------QTKVTSVSNPTIKPHSVPSHTLPSHPLTPSSKHADSKPVAL---TPAYHTLPHPSHH 665

  Fly   428 RPLRVTLP--PSNYPATAPYANLSAHFARLVKGGGLRSAIVKMLLYPQARQSIDLKRIALRKRRC 490
            .....|:.  |...|.|....:||.          ||.|       |..|.|..|         |
Mouse   666 GTPHTTISWGPLEPPKTPKPWSLSC----------LRPA-------PPLRPSAAL---------C 704

  Fly   491 HKASAKLKDLNTNQDSGQSELERQDAIELPTDSE 524
            :|     :||:.:..:.:..|.::.....|:|.|
Mouse   705 YK-----EDLSKSPKTMKKLLPKRKPERKPSDEE 733

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RtGEFNP_001097184.2 SH3_PIX 6..58 CDD:212810 34/51 (67%)
RhoGEF 79..249 CDD:238091 78/175 (45%)
PH_Cool_Pix 281..376 CDD:269932 42/98 (43%)
Arhgef7XP_036010059.1 CH_SF 3..172 CDD:469584
RhoGEF67_u1 174..220 CDD:465201
SH3_betaPIX 224..277 CDD:212994 34/52 (65%)
RhoGEF 308..485 CDD:238091 78/176 (44%)
PH_Cool_Pix 516..614 CDD:269932 42/106 (40%)
RhoGEF67_u2 673..764 CDD:465200 20/92 (22%)
betaPIX_CC 834..918 CDD:465158
Blue background indicates that the domain is not in the aligned region.

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