| Sequence 1: | NP_001097184.2 | Gene: | RtGEF / 35306 | FlyBaseID: | FBgn0015803 | Length: | 1310 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_008771873.1 | Gene: | Arhgef6 / 363509 | RGDID: | 1359674 | Length: | 789 | Species: | Rattus norvegicus |
| Alignment Length: | 654 | Identity: | 213/654 - (32%) |
|---|---|---|---|
| Similarity: | 322/654 - (49%) | Gaps: | 152/654 - (23%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 5 LVVQAEYSFMGSNNDELCFQKGDVITVTQREDGGWWEGTLNDKTGWFPSNYVNECK-VQLPLTET 68
Fly 69 IRPPEEI---------QEYRSVVLKDLLDSERAHVAELQGLLENFLEPMQQTQILSQDEYAQLMC 124
Fly 125 NFVEIVRTHEDLLIQIEECN------DRVGKLFLTSAPLMKKVHQAYCAAHPKAIVILDKYKDEL 183
Fly 184 EKYMERQGAATPGLLVLTTGLSKPFRRLDKYSAMLQELERHMESSHPDRGDTQRSVAVYKDIAAT 248
Fly 249 CSATRRQKELELQVLTGPVRGWQGQELSTLGDIIHMGSVAV--GA--DHRDRYFVLFPQTLLFLS 309
Fly 310 VSQRMSAFIYEGKLPLTGIIVNRLEDTDALKNAFEISSPLIDRIVAVCQGPNEANKWVELLN--A 372
Fly 373 NNPSLPMGIKRQLSNLSNSSLGHLNAAHLSQHLDSRGYCTRFSLCAYYSS---------PPCHVR 428
Fly 429 PLRVT----LPPSNYPATAPYANLSAHFARLVKGGGLRSAIVKMLLYPQARQSIDLKRIALRKRR 489
Fly 490 CHKASAKLKDLNTNQDSGQSELERQDAIELPTDS------ESYDDDFEDDFLHSCDSDPFEYVQF 548
Fly 549 YQNKRNDSM---------------CNSTG-TFVDHGTGARRHCSSINLIKLDSADTDEVLALNEL 597
Fly 598 KKES 601 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| RtGEF | NP_001097184.2 | SH3_PIX | 6..58 | CDD:212810 | 32/51 (63%) |
| RhoGEF | 79..249 | CDD:238091 | 75/175 (43%) | ||
| PH_Cool_Pix | 281..376 | CDD:269932 | 37/100 (37%) | ||
| Arhgef6 | XP_008771873.1 | CH | 29..129 | CDD:214479 | |
| RhoGEF67_u1 | 139..184 | CDD:293221 | |||
| SH3_alphaPIX | 186..242 | CDD:212993 | 34/54 (63%) | ||
| RhoGEF | 266..443 | CDD:238091 | 75/176 (43%) | ||
| PH_Cool_Pix | 474..572 | CDD:269932 | 37/97 (38%) | ||
| PH | 491..572 | CDD:278594 | 32/80 (40%) | ||
| RhoGEF67_u2 | 598..691 | CDD:293220 | 23/144 (16%) | ||
| betaPIX_CC | 694..780 | CDD:293131 | 15/65 (23%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 1 | 1.000 | 158 | 1.000 | Domainoid score | I4030 |
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D251777at33208 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0002550 | |
| OrthoInspector | 1 | 1.000 | - | - | otm44386 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_103985 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR46026 |
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 1 | 1.000 | - | - | X1675 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 9 | 8.920 | |||||