Sequence 1: | NP_477014.1 | Gene: | La / 35305 | FlyBaseID: | FBgn0011638 | Length: | 390 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_009893.2 | Gene: | SRO9 / 850320 | SGDID: | S000000542 | Length: | 434 | Species: | Saccharomyces cerevisiae |
Alignment Length: | 260 | Identity: | 62/260 - (23%) |
---|---|---|---|
Similarity: | 101/260 - (38%) | Gaps: | 86/260 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 6 ETPSVEAQEEV--AQPAEAQVLEAKNGDAKKDPAPAAEEAAGGFTKQERAIIRQVEYYFGDANLN 68
Fly 69 RDKFLREQIGKNEDGWVPLSVLVTFKRLASLS--TDLSEIVAALNK---SEEGLVEISEDKLSLR 128
Fly 129 RHPERPIPEHNEERRKEIQERTAYAK-GFPLDSQISELLDFAANYDKVVNLTMRKHYDKPTKSYK 192
Fly 193 FKGSIFLTFETKDQAKAFLEQEKIVYKERELLRKWQVDYLKEKQEEYAQKNEKRKNKKEAKPEPA 257
Fly 258 257 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
La | NP_477014.1 | LARP_3 | 47..129 | CDD:153397 | 30/86 (35%) |
RRM1_La | 150..226 | CDD:240737 | 15/76 (20%) | ||
RRM_SF | 263..338 | CDD:302621 | |||
SRO9 | NP_009893.2 | LHP1 | 1..434 | CDD:227520 | 62/260 (24%) |
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR22792 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |