Protein Alignment La and La2

DIOPT Version :9

• Sequence 1: NP_477014.1
• Gene: La / 35305
• FlyBaseID: FBgn0011638
• Length: 390
• Species: Drosophila melanogaster
• Sequence 2: NP_178106.2
• Gene: La2 / 844327
• AraportID: AT1G79880
• Length: 399
• Species: Arabidopsis thaliana
• Alignment Length: 403
• Identity: 91/403 - (22%)
• Similarity: 170/403 - (42%)
• Gaps: 89/403 - (22%)

  Fly    44 AGGFTKQ-ERAIIRQVEYYFGDANLNRDKFLREQIGKNEDGWVPLSVLVTFKRLASL-------- 99
            |..|.:: .:.::.|||:||.|:||..|.||..::.|::||.|.|.::.:|.|:.:|
plant     2 ASSFNEETAKKLLTQVEFYFSDSNLPTDGFLNREVTKSKDGLVSLPLVCSFSRMRNLLGLGNINR 66

  Fly   100 ---STDLSEIVAALNKSEEGLVEISEDKLSLRRHPERPIPEHNEERRKEIQERTAYAKGFPLDSQ 161
               ...:.|.||.|.::.: .:::|.:...:.|..:...|   ||..:::..||..|..|....:
plant    67 EDIPPRIVEEVANLLRTSD-FLKVSNNGQRIGRGTKLSKP---EEVLEQVHRRTLAASPFEYSIK 127

  Fly   162 ISELLDFAANYDKVVNLTMRKHY-DKPTKSYKFKGSIFLTFETKDQAKAFLEQEKIVYKERELL- 224
            :.::..|.:.|.||.::.:..:. ||    .:|.|:..:.|.::...:..|.| .:||...:|:
plant   128 MEDVSSFFSQYAKVNSVRLPPNIADK----RRFCGTALVEFSSEQDTQDILRQ-SLVYAGADLVL 187

  Fly   225 --------------------------RKWQV-----------DYLKEKQEEYAQKNEKRKNKKEA 252
                                      |:.|:           :.:..|::..|.|| |.|.|::.
plant   188 IPKSDFDCQRENMIKQLGKSESHNEFRRGQIVKFALKWIASEEKVTNKEKPSALKN-KIKEKEDK 251

  Fly   253 KPEPAFELPKNA--------------IVV--FEGAPETSSREEIREAFEKIKDFEVAYIEFAKGE 301
            :...|....:|.              :||  :..:...|| |.:::.|::....|  :||::.|.
plant   252 ETGIADREKENGDNSCASLCKDNTDQLVVPPWNNSNSVSS-EVLKDLFQRFGSVE--HIEYSGGL 313

  Fly   302 TKGSVRLTEADAAEKYIAKVE-EGKLKFKDEVSLSLRKATEEEEKEFIDKAIEFMKKRRDFTRNK 365
            ..|.|..|:::.|.|..|.|| .|.|..|:..|::|.....|.|:|        :.||......:
plant   314 DSGYVWFTDSETAMKARAAVEFVGGLVVKNNFSVALEAINGEMERE--------LWKRLSSAELE 370

  Fly   366 GKRFNRKRHGGND 378
            |.:...|:..|.|
plant   371 GGKEGHKKEKGKD 383

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
La	NP_477014.1	LARP_3	47..129	CDD:153397	25/93 (27%)
		RRM1_La	150..226	CDD:240737	17/103 (17%)
		RRM_SF	263..338	CDD:302621	24/91 (26%)
La2	NP_178106.2	LA_like_plant	9..98	CDD:153399	24/89 (27%)
		RRM_SF	116..187	CDD:388407	17/75 (23%)
		RRM2_La_like	288..350	CDD:240738	20/64 (31%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	82	1.000	Inparanoid score	I2356
OMA	1	1.010	-	-		QHG54025
OrthoDB	1	1.010	-	-		D882725at2759
OrthoFinder	1	1.000	-	-		FOG0002882
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_102594
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	7	6.880