Sequence 1: | NP_477014.1 | Gene: | La / 35305 | FlyBaseID: | FBgn0011638 | Length: | 390 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_178106.2 | Gene: | La2 / 844327 | AraportID: | AT1G79880 | Length: | 399 | Species: | Arabidopsis thaliana |
Alignment Length: | 403 | Identity: | 91/403 - (22%) |
---|---|---|---|
Similarity: | 170/403 - (42%) | Gaps: | 89/403 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 44 AGGFTKQ-ERAIIRQVEYYFGDANLNRDKFLREQIGKNEDGWVPLSVLVTFKRLASL-------- 99
Fly 100 ---STDLSEIVAALNKSEEGLVEISEDKLSLRRHPERPIPEHNEERRKEIQERTAYAKGFPLDSQ 161
Fly 162 ISELLDFAANYDKVVNLTMRKHY-DKPTKSYKFKGSIFLTFETKDQAKAFLEQEKIVYKERELL- 224
Fly 225 --------------------------RKWQV-----------DYLKEKQEEYAQKNEKRKNKKEA 252
Fly 253 KPEPAFELPKNA--------------IVV--FEGAPETSSREEIREAFEKIKDFEVAYIEFAKGE 301
Fly 302 TKGSVRLTEADAAEKYIAKVE-EGKLKFKDEVSLSLRKATEEEEKEFIDKAIEFMKKRRDFTRNK 365
Fly 366 GKRFNRKRHGGND 378 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
La | NP_477014.1 | LARP_3 | 47..129 | CDD:153397 | 25/93 (27%) |
RRM1_La | 150..226 | CDD:240737 | 17/103 (17%) | ||
RRM_SF | 263..338 | CDD:302621 | 24/91 (26%) | ||
La2 | NP_178106.2 | LA_like_plant | 9..98 | CDD:153399 | 24/89 (27%) |
RRM_SF | 116..187 | CDD:388407 | 17/75 (23%) | ||
RRM2_La_like | 288..350 | CDD:240738 | 20/64 (31%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 82 | 1.000 | Inparanoid score | I2356 |
OMA | 1 | 1.010 | - | - | QHG54025 | |
OrthoDB | 1 | 1.010 | - | - | D882725at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002882 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_102594 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
7 | 6.880 |