Protein Alignment La and LARP1b

DIOPT Version :9

• Sequence 1: NP_477014.1
• Gene: La / 35305
• FlyBaseID: FBgn0011638
• Length: 390
• Species: Drosophila melanogaster
• Sequence 2: NP_201411.2
• Gene: LARP1b / 836742
• AraportID: AT5G66100
• Length: 453
• Species: Arabidopsis thaliana
• Alignment Length: 139
• Identity: 48/139 - (34%)
• Similarity: 67/139 - (48%)
• Gaps: 28/139 - (20%)

  Fly    36 PAPAAEEAAGGFTKQE-----------RAIIRQVEYYFGDANLNRDKFLREQIGKNEDGWVPLSV 89
            |:|......|.|..|.           ..|:.||||||...||:||:.||:|:  |::||||:.|
plant   310 PSPDPMGLVGPFPLQPMYFRNFDAILYNKILTQVEYYFSADNLSRDEHLRDQM--NDEGWVPVRV 372

  Fly    90 LVTFKRLASLSTDLSEIVAALNKSEEGLVEISE---------DKLSLRRHPERPIP----EHNEE 141
            :..|:|||.|:.::..|:.||..||  :|||..         ||..|.|.|.|..|    .:|..
plant   373 IAAFRRLAELTNNIQTILEALRSSE--VVEIQGETLRRRGDWDKYLLPREPSRSGPAAGASNNAS 435

  Fly   142 RRKEIQERT 150
            ...:|:..|
plant   436 LVSQIESMT 444

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
La	NP_477014.1	LARP_3	47..129	CDD:153397	38/101 (38%)
		RRM1_La	150..226	CDD:240737	1/1 (100%)
		RRM_SF	263..338	CDD:302621
LARP1b	NP_201411.2	LAM	336..409	CDD:153396	33/76 (43%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	61	1.000	Domainoid score	I3807
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.000