Protein Alignment La and LARP6b

DIOPT Version :10

• Sequence 1: NP_477014.1
• Gene: La / 35305
• FlyBaseID: FBgn0011638
• Length: 390
• Species: Drosophila melanogaster
• Sequence 2: NP_566004.1
• Gene: LARP6b / 819002
• AraportID: AT2G43970
• Length: 545
• Species: Arabidopsis thaliana
• Alignment Length: 384
• Identity: 81/384 - (21%)
• Similarity: 151/384 - (39%)
• Gaps: 85/384 - (22%)

  Fly    26 EAKNGDAKKDPAPAAEEAAGGFTKQE-RAIIRQVEYYFGDANLNRDKFLREQIGKNEDGWVPLSV 89
            |:||....:..|..:.::..|..:.. :.|:.||||||.|.||.....|...|.|:.:|:||:.|
plant   168 ESKNDQVTETGASVSIDSKTGLPEDSIQKIVNQVEYYFSDLNLATTDHLMRFICKDPEGYVPIHV 232

  Fly    90 LVTFKRLASLSTDLSEIVAALNKSEEGLVEISEDKLSLRRHPERPIPEHNEERRKEIQERTAYAK 154
            :.:||::.::..:.|::.|.|..|.:  :.:|||...:||     |....|...:|:|.|...|:
plant   233 VASFKKIKAVINNNSQLAAVLQNSAK--LFVSEDGKKVRR-----ISPITESAIEELQSRIIVAE 290

  Fly   155 GFPLDSQISELLDFAANYDKVVNLTMRKHYDKPT-------KSYKFKGSIFLTFETKDQAKAFLE 212
            ..|.|.....|:...:....|.|:...:..:..:       .:.|..|::|     .::..||:|
plant   291 NLPEDHCYQNLMKIFSTVGSVKNIRTCQPQNNGSGAPPAARSAAKSDGTLF-----SNKVHAFVE 350

  Fly   213 QEKIVYKERELLR-----KW----QVDYLKEKQEEYAQKNEKRKNKKEAKPEPAFELPKNAIVVF 268
            .|.:...||.:..     .|    :|..:.:.|.:..::.:.|..|..           :|.|..
plant   351 YEIVELAERAVTELSEAGNWRSGLKVRLMLKHQTKEPKQGQGRGRKGH-----------DADVEH 404

  Fly   269 EGAPETSSREEIREAFEKIKDFEVAYIEFAKGETKGSVRLTEADAAEKYIAKVEEGKLKFKDEVS 333
            |....|:|.:   :..||..|                      |.:.::...::|
plant   405 EEDDATTSEQ---QPIEKQSD----------------------DCSGEWDTHMQE---------- 434

  Fly   334 LSLRKATEEEEKEFIDKAIEFMKKRRDFTRNKGK---RFNRKRHGGNDHKHGGGKKARG 389
               :...|::..|   ||.. .:|.|:..|.||:   :.::.::..|:|.|.......|
plant   435 ---QPIGEDQGNE---KAAG-QRKGRNRGRGKGRGRGQPHQNQNQNNNHSHNQNHNHNG 486

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
La	NP_477014.1	LARP_3	47..129	CDD:153397	26/82 (32%)
		RRM1_La	150..226	CDD:409733	15/87 (17%)
		RRM2_La	263..338	CDD:409957	10/74 (14%)
LARP6b	NP_566004.1	LARP_6	194..270	CDD:153402	26/77 (34%)
		RRM_La_like_plant	285..380	CDD:409730	18/99 (18%)