Sequence 1: | NP_477014.1 | Gene: | La / 35305 | FlyBaseID: | FBgn0011638 | Length: | 390 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_566004.1 | Gene: | LARP6b / 819002 | AraportID: | AT2G43970 | Length: | 545 | Species: | Arabidopsis thaliana |
Alignment Length: | 384 | Identity: | 81/384 - (21%) |
---|---|---|---|
Similarity: | 151/384 - (39%) | Gaps: | 85/384 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 26 EAKNGDAKKDPAPAAEEAAGGFTKQE-RAIIRQVEYYFGDANLNRDKFLREQIGKNEDGWVPLSV 89
Fly 90 LVTFKRLASLSTDLSEIVAALNKSEEGLVEISEDKLSLRRHPERPIPEHNEERRKEIQERTAYAK 154
Fly 155 GFPLDSQISELLDFAANYDKVVNLTMRKHYDKPT-------KSYKFKGSIFLTFETKDQAKAFLE 212
Fly 213 QEKIVYKERELLR-----KW----QVDYLKEKQEEYAQKNEKRKNKKEAKPEPAFELPKNAIVVF 268
Fly 269 EGAPETSSREEIREAFEKIKDFEVAYIEFAKGETKGSVRLTEADAAEKYIAKVEEGKLKFKDEVS 333
Fly 334 LSLRKATEEEEKEFIDKAIEFMKKRRDFTRNKGK---RFNRKRHGGNDHKHGGGKKARG 389 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
La | NP_477014.1 | LARP_3 | 47..129 | CDD:153397 | 26/82 (32%) |
RRM1_La | 150..226 | CDD:240737 | 15/87 (17%) | ||
RRM_SF | 263..338 | CDD:302621 | 10/74 (14%) | ||
LARP6b | NP_566004.1 | LARP_6 | 194..270 | CDD:153402 | 26/77 (34%) |
RRM_La_like_plant | 285..380 | CDD:240734 | 18/99 (18%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X1665 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |