DRSC/TRiP Functional Genomics Resources

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Protein Alignment La and LARP6

DIOPT Version :9

Sequence 1:NP_477014.1 Gene:La / 35305 FlyBaseID:FBgn0011638 Length:390 Species:Drosophila melanogaster
Sequence 2:NP_060827.2 Gene:LARP6 / 55323 HGNCID:24012 Length:491 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LaNP_477014.1 LARP_3 47..129 CDD:153397
RRM1_La 150..226 CDD:240737
RRM_SF 263..338 CDD:302621
LARP6NP_060827.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..87
LARP_6 93..169 CDD:153402
RRM_LARP6 184..292 CDD:409731
Nuclear export signal 186..193
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 293..403
Nuclear localization signal 296..302
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 423..491
SUZ-C 452..484 CDD:403952
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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