Protein Alignment La and larp6

DIOPT Version :9

• Sequence 1: NP_477014.1
• Gene: La / 35305
• FlyBaseID: FBgn0011638
• Length: 390
• Species: Drosophila melanogaster
• Sequence 2: XP_012825802.1
• Gene: larp6 / 493506
• XenbaseID: XB-GENE-493801
• Length: 769
• Species: Xenopus tropicalis
• Alignment Length: 306
• Identity: 70/306 - (22%)
• Similarity: 120/306 - (39%)
• Gaps: 86/306 - (28%)

  Fly     9 SVEAQEEVAQPAEAQVLEAKNGDAKKDPAPAAEEAAGGFTK----------QE---------RAI 54
            |.|.:::     |..::||  ||..:|.:...::.:|..|.          |:         :.:
 Frog   322 SAENEDQ-----EKGLMEA--GDCSEDDSARQDKYSGAATSGGENDGDELDQDWKPPDAELIQKL 379

  Fly    55 IRQVEYYFGDANLNRDKFLREQIGKNEDGWVPLSVLVTFKRLASLSTDLSEIVAALNKSEEGLVE 119
            |.|:|||..|.||.:|.||.:.:.:|:.|:|.:.:|.:||::..|:.|......||..|  .|:|
 Frog   380 ITQIEYYLSDENLEKDAFLLKHVRRNKMGFVSVKLLTSFKKVKHLTRDWRTTAYALRYS--NLLE 442

  Fly   120 ISEDKLSLRRHPERP-------------------IPEHN----EERRKEIQERTAYAKGFPLDSQ 161
            ::||...:||....|                   |||.|    |:....:||:.
 Frog   443 LNEDNRKIRRKTPVPVFPSENLPSKMLLVYDLHFIPELNCLGKEQENGGMQEKV----------- 496

  Fly   162 ISELLDFAANYDKVVNLTMRK-HYDKPTKSYKFKGSIFLTFETKDQAKAFLEQEKIVYKERELL- 224
            :..||.....:..:.::.:.| ..|.|:...:| .|.:....|||.|....|:.:...|..:..
 Frog   497 MEHLLKSFGTFGVISSIRILKPGRDLPSDVKRF-SSRYSQVGTKDCAIVEFEEVEAAIKAHDTFN 560

  Fly   225 --------------------RKWQVDYLKEKQEEYAQKNEKRKNKK 250
                                :|.|.|..||:..:..:|| |..||:
 Frog   561 VESDTEDGLKVVLIGMKPPKKKIQKDKSKEEDSKNVRKN-KSLNKR 605

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
La	NP_477014.1	LARP_3	47..129	CDD:153397	28/100 (28%)
		RRM1_La	150..226	CDD:240737	13/97 (13%)
		RRM_SF	263..338	CDD:302621
larp6	XP_012825802.1	LARP_6	376..452	CDD:153402	26/77 (34%)
		RRM_LARP6	467..575	CDD:240735	20/119 (17%)
		SUZ-C	743..757	CDD:372374

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910