Protein Alignment La and SPAC1527.03

DIOPT Version :9

• Sequence 1: NP_477014.1
• Gene: La / 35305
• FlyBaseID: FBgn0011638
• Length: 390
• Species: Drosophila melanogaster
• Sequence 2: NP_594554.1
• Gene: SPAC1527.03 / 2541645
• PomBaseID: SPAC1527.03
• Length: 475
• Species: Schizosaccharomyces pombe
• Alignment Length: 134
• Identity: 42/134 - (31%)
• Similarity: 71/134 - (52%)
• Gaps: 27/134 - (20%)

  Fly    57 QVEYYFGDANLNRDKFLREQIGKNEDGWVPLSVLVTFKRLASLSTDLSEIVAALNKSEEGLVEIS 121
            |:||||...||.:|.|||:.:  :::|:|||:.|.:|.|:.|.||||:.:.||...|:  :::::
pombe   332 QLEYYFSIENLCKDMFLRKHM--DDEGYVPLAFLASFNRIKSFSTDLNLLHAACKASD--IIDVA 392

  Fly   122 EDKLSLRRHPERPIPEHNEERRKEI--------QERTAY--AKGFPLDSQISELLDFAANYDKVV 176
            .|..|         |...:.||||.        :.|..:  || :|..:..|.:...|::   :.
pombe   393 IDLQS---------PMSIKVRRKETWSPWILPSESRLKFEMAK-YPQINSSSSMSPLASS---IS 444

  Fly   177 NLTM 180
            |||:
pombe   445 NLTI 448

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
La	NP_477014.1	LARP_3	47..129	CDD:153397	28/71 (39%)
		RRM1_La	150..226	CDD:240737	8/33 (24%)
		RRM_SF	263..338	CDD:302621
SPAC1527.03	NP_594554.1	LHP1	4..473	CDD:227520	42/134 (31%)
		LA	323..406	CDD:128955	30/86 (35%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR22792
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.100