Protein Alignment La and Larp1b

DIOPT Version :9

• Sequence 1: NP_477014.1
• Gene: La / 35305
• FlyBaseID: FBgn0011638
• Length: 390
• Species: Drosophila melanogaster
• Sequence 2: NP_001035489.2
• Gene: Larp1b / 214048
• MGIID: 1914604
• Length: 541
• Species: Mus musculus
• Alignment Length: 84
• Identity: 37/84 - (44%)
• Similarity: 57/84 - (67%)
• Gaps: 5/84 - (5%)

  Fly    54 IIRQVEYYFGDANLNRDKFLREQIGKNEDGWVPLSVLVTFKRLASLSTDLSEIVAALNKSEEGLV 118
            |.||:||||...||.||.|||.::  :|.|::|:|::..|.|:.:|:|:|:.|:.||..|.|  |
Mouse   425 IKRQIEYYFSTENLERDFFLRRKM--DEQGFLPISLIAGFHRVQALTTNLNLILEALKDSTE--V 485

  Fly   119 EISEDKLSLRRHPER-PIP 136
            ||.::|:..:..||: |||
Mouse   486 EIVDEKMRKKIEPEKWPIP 504

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
La	NP_477014.1	LARP_3	47..129	CDD:153397	32/74 (43%)
		RRM1_La	150..226	CDD:240737
		RRM_SF	263..338	CDD:302621
Larp1b	NP_001035489.2	LARP_2	422..494	CDD:153407	32/72 (44%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	1	1.000