Protein Alignment La and Larp4

DIOPT Version :9

• Sequence 1: NP_477014.1
• Gene: La / 35305
• FlyBaseID: FBgn0011638
• Length: 390
• Species: Drosophila melanogaster
• Sequence 2: NP_001271452.1
• Gene: Larp4 / 207214
• MGIID: 2443114
• Length: 720
• Species: Mus musculus
• Identity: / - (0%)
• Similarity: / - (0%)
• Gaps: / - (0%)

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
La	NP_477014.1	LARP_3	47..129	CDD:153397
		RRM1_La	150..226	CDD:240737
		RRM_SF	263..338	CDD:302621
Larp4	NP_001271452.1	Interaction with PABPC1. /evidence=ECO:0000250|UniProtKB:Q71RC2	13..22
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	22..56
		Interaction with the poly-A tract of mRNA. /evidence=ECO:0000250|UniProtKB:Q71RC2	108..300
		LARP_4	117..191	CDD:153404
		RRM_LARP4	196..272	CDD:241151
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	364..399
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	438..471
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	530..563
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	577..602
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	616..720

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910