Sequence 1: | NP_477014.1 | Gene: | La / 35305 | FlyBaseID: | FBgn0011638 | Length: | 390 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_011536131.1 | Gene: | LARP4 / 113251 | HGNCID: | 24320 | Length: | 732 | Species: | Homo sapiens |
Alignment Length: | 395 | Identity: | 69/395 - (17%) |
---|---|---|---|
Similarity: | 138/395 - (34%) | Gaps: | 133/395 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 56 RQVEYYFGDANLNRDKFLREQIGKNEDGWVPLSVLVTFKRLASLSTDLSEIVAALNKSEEGLVEI 120
Fly 121 SEDKLSLRRHPERPIPEHNEERR-----KEIQERTAYAKGFPLDSQISELLDFAANYDKVVNLTM 180
Fly 181 RKHYDKPTKSYKFKGSIFLTFET---KDQAKAFLEQEKIVYKERELLRKWQV------------- 229
Fly 230 -----DYLKEKQEEYAQK-------NEKRK--------NKKEAKPEPAFELP------------- 261
Fly 262 -------KNAIVVFEGAPETSSREEIREAFEKIKDFEVAYIEFAKGETKGSVRLTEAD------- 312
Fly 313 --AAEKYIAKVEEGKLKFKDEVSLSLRKATEEEEKEFIDKAIEFMKKRRDFTRNKGKR--FNRKR 373
Fly 374 HGGND 378 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
La | NP_477014.1 | LARP_3 | 47..129 | CDD:153397 | 18/72 (25%) |
RRM1_La | 150..226 | CDD:240737 | 12/78 (15%) | ||
RRM_SF | 263..338 | CDD:302621 | 15/83 (18%) | ||
LARP4 | XP_011536131.1 | LARP_4 | 128..202 | CDD:153404 | 19/79 (24%) |
RRM_LARP4 | 207..283 | CDD:241151 | 15/94 (16%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |