DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10651 and R3hdml

DIOPT Version :10

Sequence 1:NP_610029.2 Gene:CG10651 / 35303 FlyBaseID:FBgn0032853 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_001102432.1 Gene:R3hdml / 366245 RGDID:1305296 Length:253 Species:Rattus norvegicus


Alignment Length:158 Identity:36/158 - (22%)
Similarity:63/158 - (39%) Gaps:21/158 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 PKQAAAMVKMSWDMIALIVDKHNEYRNKFAGGMDQ------------NPKAARMTTIEWDPELAK 99
            ||..|.     |.:..|.|.:|...|:..|..|:.            :|.|:.|..:.||.:||:
  Rat    36 PKNIAV-----WPLSGLGVPRHRRKRHISARDMNALLDYHNHIRASVHPPASNMEYMVWDEQLAR 95

  Fly   100 VADGLVRRCEPIRDQCAITPNYGHAEVSYSLEKYFCMTTKKEALRKQLDHWFDPNSKDEVQKLFF 164
            .|:....:|........:|...|. .:|....:|..:....::..::..|:..|..||.....  
  Rat    96 AAEAWATQCIWAHGPSQLTKYVGQ-NLSVHSGRYRSVVDLVKSWSEEKRHYSFPAPKDCTPHC-- 157

  Fly   165 SWTKNQQELSKNYFQVLRDRANRVGCAI 192
            .|..:....| :|.|::...::|:||||
  Rat   158 PWLCSGPVCS-HYTQMVWASSSRLGCAI 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10651NP_610029.2 CAP_euk 61..210 CDD:349399 32/144 (22%)
R3hdmlNP_001102432.1 CAP_R3HDML 63..208 CDD:349409 27/126 (21%)

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