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Protein Alignment Kua and Peds1

DIOPT Version :9

Sequence 1:	NP_001188856.1	Gene:	Kua / 35300	FlyBaseID:	FBgn0032850	Length:	310	Species:	Drosophila melanogaster
Sequence 2:	NP_663513.1	Gene:	Peds1 / 407243	MGIID:	2142624	Length:	271	Species:	Mus musculus

Alignment Length:	248	Identity:	148/248 - (59%)
Similarity:	182/248 - (73%)	Gaps:	2/248 - (0%)

- Green bases have known domain annotations that are detailed below.

  Fly    63 RWGPQNKGAQELALLYSPGKRAQEIICVYTCIGLMIINLALIVRHLRLERISVAFLSALCGIITA 127
            |||.|:.||:|||.|||||||.||...|..|..|:..||..::...|.|...:..|..:.|.:.|
Mouse    24 RWGAQHAGARELAALYSPGKRFQEWCSVILCFSLIAHNLVHLLLLARWEHTPLVILGVVAGALVA 88

  Fly   128 DFASGLVHWAADTWGSVDIPMIGKNFLRPFREHHLDPTSITRHDFIETNGDNFMVG-IPILGYLA 191
            ||.||||||.||||||||:|::||.|:|||||||:|||:|||||||||||||.:|. :|:|. :|
Mouse    89 DFLSGLVHWGADTWGSVDLPIVGKAFIRPFREHHIDPTAITRHDFIETNGDNCLVTLLPLLN-MA 152

  Fly   192 HYFYIRTPSEIQQHFGWIAYVFLCSIFVAMTNQIHKWSHTYWGLPRWVLLLQSCHIILPRKHHRI 256
            :.|..::|..::|.:.|..:||..:||...|||||||||||.|||.||.:||..|:|||||||||
Mouse   153 YKFRTQSPETLEQLYPWECFVFCLTIFGTFTNQIHKWSHTYLGLPYWVTVLQDWHVILPRKHHRI 217

  Fly   257 HHVAPHETYFCITTGWLNWPLERIRFWSTFELIIEHFTGLKPRDDDLKWAKKL 309
            ||||||||||||||||||:|||.|.||...|.:|:..||.|||.||:|||:|:
Mouse   218 HHVAPHETYFCITTGWLNYPLEVIGFWRRLEDLIQGLTGEKPRADDMKWAQKI 270

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.