DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment APRT and aprt-1

DIOPT Version :10

Sequence 1:NP_000476.1 Gene:APRT / 353 HGNCID:626 Length:180 Species:Homo sapiens
Sequence 2:NP_491663.1 Gene:aprt-1 / 172232 WormBaseID:WBGene00020557 Length:185 Species:Caenorhabditis elegans


Alignment Length:172 Identity:79/172 - (45%)
Similarity:112/172 - (65%) Gaps:1/172 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     9 VEQRIRSFPDFPTPGVVFRDISPVLKDPASFRAAIGLLARHLKATHGGRIDYIAGLDSRGFLFGP 73
            :||.||...|||..|:.||||.|:..:|........::|.|::.| .|.:|.:|||::|||||||
 Worm    13 IEQHIREVKDFPKKGINFRDIMPLFTNPQLVNELCVVIADHVRHT-VGHVDSVAGLEARGFLFGP 76

Human    74 SLAQELGLGCVLIRKRGKLPGPTLWASYSLEYGKAELEIQKDALEPGQRVVVVDDLLATGGTMNA 138
            .:|.:||:..|.|||:|||||.|:.|||..|||:..:|||:.|::.|..|.::|||||||||:.|
 Worm    77 QVAIQLGVPFVPIRKKGKLPGATIEASYVKEYGEDRVEIQEGAIKNGDIVFLIDDLLATGGTLRA 141

Human   139 ACELLGRLQAEVLECVSLVELTSLKGREKLAPVPFFSLLQYE 180
            |.:|:.:...:|.|...|:||..|.||.||..|...:|:.|:
 Worm   142 ATDLVVKAGGKVGEAFVLIELAPLNGRSKLPDVNLTTLISYD 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
APRTNP_000476.1 apt 9..179 CDD:273437 78/169 (46%)
aprt-1NP_491663.1 PRK02304 12..183 CDD:235028 78/170 (46%)

Return to query results.
Submit another query.