DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpS18B and MRPS18B

DIOPT Version :10

Sequence 1:NP_523606.1 Gene:mRpS18B / 35299 FlyBaseID:FBgn0032849 Length:204 Species:Drosophila melanogaster
Sequence 2:NP_054765.1 Gene:MRPS18B / 28973 HGNCID:14516 Length:258 Species:Homo sapiens


Alignment Length:148 Identity:68/148 - (45%)
Similarity:94/148 - (63%) Gaps:8/148 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 APDPKDRSKPIPV----ETSIRYLKSAAYKQTYGEDFVWTQYRRNHKGMYAPRKTRKTCIRQNRI 117
            ||..:|....:|:    :...:||:|..|::.||...||..|||||||...|::|||||||:|::
Human    36 APSEEDSLSSVPISPYKDEPWKYLESEEYQERYGSRPVWADYRRNHKGGVPPQRTRKTCIRRNKV 100

  Fly   118 STGNPCPICRDEYLVLDYRNTELLEQFISPHSGDVLSYSKTGLCQKSHLRLMVAVQQARDSGYLT 182
             .|||||||||..|.:|:||.:|||||:..|:|.:.....||:|.|.|.||..|:|:|||.|.|.
Human   101 -VGNPCPICRDHKLHVDFRNVKLLEQFVCAHTGIIFYAPYTGVCVKQHKRLTQAIQKARDHGLLI 164

  Fly   183 YDVPF---REYDYSEYYG 197
            |.:|.   |:.|:|..:|
Human   165 YHIPQVEPRDLDFSTSHG 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpS18BNP_523606.1 Ribosomal_S18 131..181 CDD:460054 24/49 (49%)
MRPS18BNP_054765.1 Ribosomal_S18 111..163 CDD:460054 24/51 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 214..258
Blue background indicates that the domain is not in the aligned region.

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