DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mRpS18B and mRpS18B

DIOPT Version :10

Sequence 1:NP_523606.1 Gene:mRpS18B / 35299 FlyBaseID:FBgn0032849 Length:204 Species:Drosophila melanogaster
Sequence 2:XP_061516336.1 Gene:mRpS18B / 1277909 VectorBaseID:AGAMI1_000384 Length:267 Species:Anopheles gambiae


Alignment Length:196 Identity:120/196 - (61%)
Similarity:144/196 - (73%) Gaps:7/196 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LVNITRNSRGALHTASALRCKAETSTEENNAAAT-----EGEGEDNASGSAP--DPKDRSKPIPV 69
            |:.|..:...||.|...||..|:..:|....|||     .||.:.||:...|  |||||::.|||
Mosquito    66 LLTIGTSQARALTTTGFLRHAAKPESEATEEAATGEEPEAGEADANAAPKQPVDDPKDRTRVIPV 130

  Fly    70 ETSIRYLKSAAYKQTYGEDFVWTQYRRNHKGMYAPRKTRKTCIRQNRISTGNPCPICRDEYLVLD 134
            |||||||.|.||:|||.:|.||.||||||||.|.|:.|||||||:.|||||||||||||||||||
Mosquito   131 ETSIRYLASEAYRQTYQDDPVWKQYRRNHKGPYPPKLTRKTCIRKGRISTGNPCPICRDEYLVLD 195

  Fly   135 YRNTELLEQFISPHSGDVLSYSKTGLCQKSHLRLMVAVQQARDSGYLTYDVPFREYDYSEYYGQE 199
            :.|.:||:|||||.:||||||..||||||.|.:|:|||::|.|.|.||:|||||||||||||.::
Mosquito   196 HNNIDLLKQFISPQTGDVLSYRVTGLCQKKHTQLLVAVERAMDRGMLTFDVPFREYDYSEYYPEK 260

  Fly   200 Q 200
            :
Mosquito   261 E 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpS18BNP_523606.1 Ribosomal_S18 131..181 CDD:460054 32/49 (65%)
mRpS18BXP_061516336.1 None

Return to query results.
Submit another query.