DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpS18B and mrps18b

DIOPT Version :10

Sequence 1:NP_523606.1 Gene:mRpS18B / 35299 FlyBaseID:FBgn0032849 Length:204 Species:Drosophila melanogaster
Sequence 2:XP_002939508.2 Gene:mrps18b / 100489063 XenbaseID:XB-GENE-478912 Length:222 Species:Xenopus tropicalis


Alignment Length:137 Identity:65/137 - (47%)
Similarity:84/137 - (61%) Gaps:5/137 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 DPKDRSKPIPVETSIRYLKSAAYKQTYGEDFVWTQYRRNHKGMYAPRKTRKTCIRQNRISTGNPC 123
            |...|.|..|.|    |:.|..|.|.||:..||..|||||||...|:||||||:|..: :.||||
 Frog    41 DASSRYKDQPWE----YMNSEEYLQQYGQKSVWADYRRNHKGPIPPQKTRKTCVRGGK-TCGNPC 100

  Fly   124 PICRDEYLVLDYRNTELLEQFISPHSGDVLSYSKTGLCQKSHLRLMVAVQQARDSGYLTYDVPFR 188
            |||||:.|.|:|||.:||:|||.||:|.|...:|||:|.|....|:.|:.:|.|.|.|...||:.
 Frog   101 PICRDQKLGLNYRNVKLLQQFICPHTGTVYDPTKTGVCMKQQKALVKAITEATDHGLLPAHVPYI 165

  Fly   189 EYDYSEY 195
            ...:.:|
 Frog   166 VLPHEDY 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpS18BNP_523606.1 Ribosomal_S18 131..181 CDD:460054 24/49 (49%)
mrps18bXP_002939508.2 Ribosomal_S18 106..158 CDD:460054 24/51 (47%)

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