DRSC/TRiP Functional Genomics Resources

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Protein Alignment neb and KIP3

DIOPT Version :10

Sequence 1:NP_476817.1 Gene:neb / 35293 FlyBaseID:FBgn0004374 Length:1121 Species:Drosophila melanogaster
Sequence 2:NP_011299.1 Gene:KIP3 / 852655 SGDID:S000003184 Length:805 Species:Saccharomyces cerevisiae


Alignment Length:995 Identity:230/995 - (23%)
Similarity:385/995 - (38%) Gaps:302/995 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 YTPSSLYRNANSTPG-RAKTPGTGKSSC-------------------SRTKERDSLME------- 110
            :|.....|..|...| .|..||.|.||.                   |...:|:||:.       
Yeast    20 FTSMEKTRLVNEASGAEANFPGLGDSSLILPMSNNSDSDIDIDAEEGSTRSKRNSLLRRKVIRPE 84

  Fly   111 ------SCLSVSEESNMIV---AVRVRPLN-----ALECTRGQVTNVVQVHGNSNELTVQAGSSA 161
                  .|:    :..|::   |.| .|||     .|...|.:.|.......|::..|.:..|..
Yeast    85 GIRKIVDCV----DDRMLIFDPADR-NPLNKVSDQVLNSMRARATKATASSINNSNATNKFSSQR 144

  Fly   162 DASAGVTHFFSYDQVYYSCDPERKNFACQAKVFEGTARPLIDTAFEGYNACLFAYGQTGSGKSYS 226
            ....|...|. :|:::       ...:.||:|::.|..||:|:..:|:|:.:||||.||.||:|:
Yeast   145 RRHGGEIKFV-FDKLF-------DETSSQARVYKETTSPLLDSVLDGFNSTVFAYGATGCGKTYT 201

  Fly   227 MMGIEALDDAALDGGPPHDEAGIIPRFCHELFRRIEAVKSQQQLQVEVEVSYFEIYNEKIHDLLS 291
            :.|..:             :.|||.....|||.:|..:|.::..  |:.:||.|||||:|.|||.
Yeast   202 VSGTPS-------------QPGIIFLAMEELFNKITDLKDEKDF--EISLSYLEIYNERIRDLLK 251

  Fly   292 VQHAAAATGESTPIQQQQQQQRPALKVREHPIFGPYVVDLSAHSVDSYSALRNWLAVGNSQRATA 356
            .:         ||.::        |.:||.......|.:||.|..::...:.:.:..||..|.|:
Yeast   252 PE---------TPSKR--------LVIREDTQNHIKVANLSYHHPNTVEDVMDLVVQGNINRTTS 299

  Fly   357 STAMNDKSSRSHSIFNIVL----NLTDLSSDDGLSSDTDSSTASSLRQTRRSKISLVDLAGSERI 417
            .|..|:.|||||::..|.:    .|.||:|                 |...:.:|::|||||||.
Yeast   300 PTEANEVSSRSHAVLQIHIMQTNKLVDLTS-----------------QHTFATLSIIDLAGSERA 347

  Fly   418 SVSGSNGERIREGVSINKSLLTLGKVIAALADSRKAIANGPLGSGTPSTFVPYRESVLTWLLREN 482
            :.:.:.|.|:.||.:||:|||.||..|.||.          |..|:.|..:|||:|.||.||:.:
Yeast   348 AATRNRGIRLHEGANINRSLLALGNCINALC----------LNDGSRSCHIPYRDSKLTRLLKFS 402

  Fly   483 LGGNSKTVMLATISPASIHADETLATLRYACKARSIVNRVKVNE---SPHD----KIIRDLRAEV 540
            ||||.||||:..|||:|.|.||||.||:||.:|:.|..::..|:   |.|.    |:|.:.:.::
Yeast   403 LGGNCKTVMIVCISPSSSHYDETLNTLKYANRAKEIKTKIIRNQQSLSRHVGSYLKMITEQKRQI 467

  Fly   541 DRLKSLRNEYERQRRLSGNSNNPVPRKIIIETSVDETEVEALRQQLAERERELSRAQKSW--MEK 603
            :.|:      ||:.::             |...:.:.::...:.|||..|. ::|.|:::  :|.
Yeast   468 EELR------EREEKM-------------ISLKLTKYKLNKEKIQLAINEC-VNRVQQTYAGVET 512

  Fly   604 LKEAEDQRKSELRVLKRRGLALELTAEQKQACLVNLTADPILSGTLFYLLPQGLVRIGRGRLPGG 668
            .:.|:..:  .|.:.|||.|.           :|.|..|.::  .||            .|....
Yeast   513 YQVAKTLK--SLILCKRRFLQ-----------MVKLEVDNLI--LLF------------EREEST 550

  Fly   669 SSSSQPDIVLDGPLVALQHCSIEHERGGKLYVIPGSEDFETYVNGELLKDRRQLFHGDRLVIGGS 733
            ::..||         .:.:|.                                       :|.|.
Yeast   551 AAEMQP---------VISNCR---------------------------------------MISGQ 567

  Fly   734 HYFRISNPFCSQRGKADHPVDFQLAHQEILQKQEQQLRSELEAEKRAALTKIEQERAQHARDFEE 798
            .|.:|            |.::.:....:.|.....|:.|            |:..:.:...|::|
Yeast   568 LYNKI------------HELEMKFDETDTLSSVIHQVHS------------IDLNKLREMEDWDE 608

  Fly   799 RLQCLELEQFKYKCNSEMLETERQALALAQQQEHTPLRHEDAVSTPAQKS--------------- 848
            ....:.||    .|.:::.|.:|..:.:     ::.:..|..:|.|...|               
Yeast   609 TYDLVYLE----SCLNQISELQRNEILV-----NSSIMTEKLMSDPGLNSRFKFLSKWLMNRTPN 664

  Fly   849 --TILEDIQRI-----------MLNPSEESLHKTQLMVKEATQRCRQLDLPLEFRQTQTPDEFGL 900
              :|::|:..|           :.|| :.:...|.:.:...|  ...|.:|.|..|.|...:   
Yeast   665 IESIIQDLVHIDEEFESFARTFIANP-DSNFTNTNINIINTT--AADLAVPAETLQRQNFSQ--- 723

  Fly   901 LRTVILILDKQRGLKAEWPTARLGVWLDLVRDNAEQQEKLNATTIFQSVEVDWEPLDADLNETLS 965
                         .|.:|.:..|.. ..::....|.:.:|:......:.|||....|...||...
Yeast   724 -------------KKVKWTSPDLSP-SPMIEPQPELEPELHQDQDAIASEVDVSMQDTTFNEQGP 774

  Fly   966 DTHNSSRIALNLSAMKDVLL 985
            .|.::...|:....|:..||
Yeast   775 STPSAPTTAVPRRKMRSSLL 794

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nebNP_476817.1 KISc_KIF1A_KIF1B 119..525 CDD:276816 136/417 (33%)
SMC_N 514..>615 CDD:481474 19/109 (17%)
FHA_KIF14 627..741 CDD:438759 13/113 (12%)
KIP3NP_011299.1 KISc_KIP3_like 82..438 CDD:276821 136/427 (32%)

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