DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment neb and AT1G72250

DIOPT Version :10

Sequence 1:NP_476817.1 Gene:neb / 35293 FlyBaseID:FBgn0004374 Length:1121 Species:Drosophila melanogaster
Sequence 2:NP_001320541.1 Gene:AT1G72250 / 843557 AraportID:AT1G72250 Length:1216 Species:Arabidopsis thaliana


Alignment Length:586 Identity:173/586 - (29%)
Similarity:266/586 - (45%) Gaps:133/586 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 KERDSLMESCLSVSEESNMIVAVRVRPLNALECTRGQVTNVVQVHGNSN-ELTVQAGSSADASAG 166
            |||..|....|.:  :.|:.|..|.|||| .|.|...|:..:.|....| |:.|.:......|  
plant   497 KERKELYNKILEL--KGNIRVFCRCRPLN-FEETEAGVSMGIDVESTKNGEVIVMSNGFPKKS-- 556

  Fly   167 VTHFFSYDQVYYSCDPERKNFACQAKVFEGTARPLIDTAFEGYNACLFAYGQTGSGKSYSMMGIE 231
                |.:|.|:   .|.    |.||.|||.|| |...:..:|||.|:|||||||:||:::|.|.:
plant   557 ----FKFDSVF---GPN----ASQADVFEDTA-PFATSVIDGYNVCIFAYGQTGTGKTFTMEGTQ 609

  Fly   232 ALDDAALDGGPPHDEAGIIPRFCHELFRRIEAVKSQQQLQVEVEVSYFEIYNEKIHDLLSVQHAA 296
                        ||. |:..|....|||.|:|  .:.:...|:.||..|:|||:|.|||.....:
plant   610 ------------HDR-GVNYRTLENLFRIIKA--REHRYNYEISVSVLEVYNEQIRDLLVPASQS 659

  Fly   297 AATGESTPIQQQQQQQRPALKVREHPIFGPYVVDLSAHSVDSYSALRNW--LAVGNSQRATASTA 359
            |:..:...|:|        |....|.:  |.:|:....|::..     |  |..|::.||...|.
plant   660 ASAPKRFEIRQ--------LSEGNHHV--PGLVEAPVKSIEEV-----WDVLKTGSNARAVGKTT 709

  Fly   360 MNDKSSRSHSIFNIVLNLTDLSSDDGLSSDTDSSTASSLRQTRRSKISLVDLAGSERISVSGSNG 424
            .|:.|||||.|..:::...:|.:.                :..:||:.|||||||||::.:...|
plant   710 ANEHSSRSHCIHCVMVKGENLLNG----------------ECTKSKLWLVDLAGSERVAKTEVQG 758

  Fly   425 ERIREGVSINKSLLTLGKVIAALADSRKAIANGPLGSGTPSTFVPYRESVLTWLLRENLGGNSKT 489
            ||::|..:|||||..||.||.|||:.              |:.:|:|.|.||.||:::|||:|||
plant   759 ERLKETQNINKSLSALGDVIFALANK--------------SSHIPFRNSKLTHLLQDSLGGDSKT 809

  Fly   490 VMLATISPASIHADETLATLRYACKARSIVNRVKVNESPHDKIIRDLRAEVDRLK-SLRNEYERQ 553
            :|...|||......|||.:|.:|.:.|.|.......:..:.:::: .:..|::.| .::.:.|:.
plant   810 LMFVQISPNENDQSETLCSLNFASRVRGIELGPAKKQLDNTELLK-YKQMVEKWKQDMKGKDEQI 873

  Fly   554 RRLSGNSNNPVPRKIIIETSVDETEVEALRQQLAERERELSRAQKSWMEKLKEAEDQRKSELRVL 618
            |::                   |..:..|..::.||:.:    .|:..:|:||.|.|...| |.|
plant   874 RKM-------------------EETMYGLEAKIKERDTK----NKTLQDKVKELESQLLVE-RKL 914

  Fly   619 KRRGLALELTAEQ-KQAC-----------------------LVNLTADPILSGTLFY---LLPQG 656
            .|:.:..::..:| ||..                       :||||...:|..|..|   .||.|
plant   915 ARQHVDTKIAEQQTKQQTEDENNTSKRPPLTNILLGSASKEMVNLTRPSLLESTTSYDLAPLPSG 979

  Fly   657 L 657
            :
plant   980 V 980

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nebNP_476817.1 KISc_KIF1A_KIF1B 119..525 CDD:276816 137/408 (34%)
SMC_N 514..>615 CDD:481474 16/101 (16%)
FHA_KIF14 627..741 CDD:438759 13/58 (22%)
AT1G72250NP_001320541.1 Malectin 173..316 CDD:432024
CENP-F_leu_zip <355..465 CDD:463102
KISc_C_terminal 510..840 CDD:276817 137/404 (34%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.