DRSC/TRiP Functional Genomics Resources

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Protein Alignment neb and AT4G38950

DIOPT Version :10

Sequence 1:NP_476817.1 Gene:neb / 35293 FlyBaseID:FBgn0004374 Length:1121 Species:Drosophila melanogaster
Sequence 2:NP_195606.2 Gene:AT4G38950 / 830050 AraportID:AT4G38950 Length:836 Species:Arabidopsis thaliana


Alignment Length:491 Identity:138/491 - (28%)
Similarity:240/491 - (48%) Gaps:93/491 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 LSVSEESNMIVAVRVRPLNALECTRGQVTNVVQVHGNSNELTVQAGSSADASAGVTHFFSYDQVY 177
            :.|:.|..::|.||:||||..|....:..:...:    |:.|:...::....:.....:|:|:||
plant     6 MPVAREEKILVLVRLRPLNQKEIAANEAADWECI----NDTTILYRNTLREGSNFPSAYSFDKVY 66

  Fly   178 YSCDPERKNFACQAKVFEGTARPLIDTAFEGYNACLFAYGQTGSGKSYSMMGIEALDDAALDGGP 242
            ....|.|       :|:|...:.:..:..:|.|..:||||||.|||:|:|.||.....|      
plant    67 RGECPTR-------QVYEDGTKEIALSVVKGINCSIFAYGQTSSGKTYTMTGITEFAVA------ 118

  Fly   243 PHDEAGIIPRFCHELFRRIEAVKSQQQLQVEVEVSYFEIYNEKIHDLLSVQHAAAATGESTPIQQ 307
                         ::|   :.:...::....|:.|..|||||.|.||||      :.|.|     
plant   119 -------------DIF---DYIFQHEERAFSVKFSAIEIYNEAIRDLLS------SDGTS----- 156

  Fly   308 QQQQQRPALKVREHPIFGPYVVDLSAHSVDSYSALRNWLAVGNSQRATASTAMNDKSSRSHSIFN 372
                    |::|:.|..|..|...:..::..::.|:..|::..:||....|::|::|||||.:..
plant   157 --------LRLRDDPEKGTVVEKATEETLRDWNHLKELLSICEAQRKIGETSLNERSSRSHQMIR 213

  Fly   373 IVLNLTDLSSDDGLSSDTDSSTASSLRQTRRSKISLVDLAGSERISVSGSNGERIREGVSINKSL 437
            :.:   :.|:.:.|..:..::..:|        ::.:|||||||.|.:.|.|.|::||..||:||
plant   214 LTV---ESSAREFLGKENSTTLMAS--------VNFIDLAGSERASQAMSAGTRLKEGCHINRSL 267

  Fly   438 LTLGKVIAALADSRKAIANGPLGSGTPSTFVPYRESVLTWLLRENLGGNSKTVMLATISPASIHA 502
            ||||.||..|:..|:...|             :|:|.||.:|:..||||::|.::.|:|||..|.
plant   268 LTLGTVIRKLSKGRQGHIN-------------FRDSKLTRILQPCLGGNARTAIICTLSPARSHV 319

  Fly   503 DETLATLRYACKARSIVNRVKVNESPHDK-IIRDLRAEVDRLKS-LRNEYERQRRLSGNSNN--- 562
            :.|..||.:||.|:.:..:.::|....|| :::.|:.|:.||:: |||.      .|..::|   
plant   320 ELTKNTLLFACCAKEVTTKARINVVMSDKALLKQLQRELARLETELRNP------ASSPASNCDC 378

  Fly   563 -PVPRKIIIETSVDETEVEALRQQLAERERELSRAQ 597
             ...||..::....|.|:..||:|     |:|::::
plant   379 AMTVRKKDLQIQKMEKEIAELRKQ-----RDLAQSR 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nebNP_476817.1 KISc_KIF1A_KIF1B 119..525 CDD:276816 115/405 (28%)
SMC_N 514..>615 CDD:481474 22/90 (24%)
FHA_KIF14 627..741 CDD:438759
AT4G38950NP_195606.2 KISc_CENP_E 13..335 CDD:276825 115/397 (29%)
DUF3490 657..817 CDD:463424
Blue background indicates that the domain is not in the aligned region.

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