DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment neb and POK1

DIOPT Version :9

Sequence 1:NP_476817.1 Gene:neb / 35293 FlyBaseID:FBgn0004374 Length:1121 Species:Drosophila melanogaster
Sequence 2:NP_001326049.1 Gene:POK1 / 820999 AraportID:AT3G17360 Length:2075 Species:Arabidopsis thaliana


Alignment Length:1240 Identity:308/1240 - (24%)
Similarity:503/1240 - (40%) Gaps:320/1240 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 IQQFQ-TRGVHKSTPASEMRKKVLMTRA----------EDREHRDRPEQLLNTAFSGSTPQPKPK 65
            :|:.: ||..|:.|...|.:.:||..||          .:|..:.|.|.  |:|  .|||.....
plant    52 VQKLEGTRAQHQRTLGPEKKFEVLEGRAGNSSDSNPKIVNRNGKSRSEP--NSA--QSTPTRNGA 112

  Fly    66 PTAL-NACYTPSSLYRNANSTPGRAKTPGTGKS-----SCSRTKERDSLMESCLSVSEESNMIVA 124
            ..:| ..|.|.:   |...|..||.:.| .|.|     |.:.|.....|.|. .|..::.|:.|.
plant   113 RVSLGGGCATGA---RFLQSFGGRGRIP-RGVSIAESVSFAETTPHFELNED-HSFWKDHNVQVL 172

  Fly   125 VRVRPLNALECTRGQVTNVVQVHG-----NSNELTVQAGSSADASAGVTHFFSYDQVYYSCDPER 184
            :|:|||..:|       ...|.:|     .|.:..|..|              :.:..::.|...
plant   173 IRLRPLGTME-------RANQGYGKCLKQESPQTLVWLG--------------HPEARFTFDHVA 216

  Fly   185 KNFACQAKVFEGTARPLIDTAFEGYNACLFAYGQTGSGKSYSMMGIEALDDAALDGGPPHDEAGI 249
            .....|.|:|.....|:::....|||:|:||||||||||:|:|||  .:.:|.   |...::.|:
plant   217 SETISQEKLFRVAGLPMVENCLSGYNSCVFAYGQTGSGKTYTMMG--EISEAE---GSLGEDCGV 276

  Fly   250 IPRFCHELFRRI---EAVKSQQQLQVEVEVSYFEIYNEKIHDLLSVQHAAAATGESTPIQQQQQQ 311
            ..|....||.||   |..:..:.|:...:.|:.|||||:|.|||.        ..||.:|     
plant   277 TARIFEYLFSRIKMEEEERRDENLKFSCKCSFLEIYNEQITDLLE--------PSSTNLQ----- 328

  Fly   312 QRPALKVREHPIFGPYVVDLSAHSVDSYSALRNWLAVGNSQRATASTAMNDKSSRSHSIFNIVLN 376
                  :||....|.||.:|..|:|.:.|.:...|..|.:.|..|:|.||.:||||||:|...:.
plant   329 ------LREDLGKGVYVENLVEHNVRTVSDVLKLLLQGATNRKIAATRMNSESSRSHSVFTCTIE 387

  Fly   377 LTDLSSDDGLSSDTDSSTASSLRQTRRSKISLVDLAGSERISVSGSNGERIREGVSINKSLLTLG 441
              .|...|            ||.::|.::::|||||||||...||:.|:|::|..:|||||.|||
plant   388 --SLWEKD------------SLTRSRFARLNLVDLAGSERQKSSGAEGDRLKEAANINKSLSTLG 438

  Fly   442 KVIAALADSRKAIANGPLGSGTPSTFVPYRESVLTWLLRENLGGNSKTVMLATISPASIHADETL 506
            .||.:|.|    :|:|      ....||||:|.||:||:::|||||||:::|.:||:....:|||
plant   439 LVIMSLVD----LAHG------KHRHVPYRDSRLTFLLQDSLGGNSKTMIIANVSPSLCSTNETL 493

  Fly   507 ATLRYACKARSIVNRVKVNESPHDKIIRDLRAEVDRLK----SLRNEYE------------RQRR 555
            :||::|.:|:.|.|..||||.....:.. |:.|:.:||    ||...::            .:.|
plant   494 STLKFAQRAKLIQNNAKVNEDASGDVTA-LQQEIRKLKVQLTSLLKNHDSCGALSDCISSLEESR 557

  Fly   556 LSGNSNNPVPRKIIIETSVDE--TEVEALRQQLAERERELSRAQKSWMEKLKEAEDQRKSELRVL 618
            .||..      |:..||..|:  .:|:.:...:....|.         ||:.|:..| |||..:.
plant   558 YSGTC------KVAGETRQDKCHCQVKNMNDNMIGALRR---------EKIAESALQ-KSEAEIE 606

  Fly   619 KRRGLALELTAEQKQ-ACLVNLTADPI------LSGTLF---YLLPQGLVRIGRGRLPGGSSSSQ 673
            :...|..::..:.|: ..::||..:.:      .||:|.   .|:.:.....|..:|...|....
plant   607 RIDCLVRDMEEDAKRIKIMLNLREEKVGEMEFCTSGSLMTKECLIEENKTLKGEIKLLRDSIDKN 671

  Fly   674 PDIVLDGPLVALQHCSI-----------EH-ERGGKLYVIPG------------SEDFETYV--- 711
            |::...    ||::..:           || ||...|..:.|            .|.|..:|   
plant   672 PELTRS----ALENTKLREQLQRYQKFYEHGEREALLAEVTGLRDQLLDVLEAKDESFSKHVMKE 732

  Fly   712 -------------NGELLKDRRQLFHGDRLVIGGSHYFRI----SNPFCSQRGKADHPVDFQLAH 759
                         |..|:::.      |.:..|...|...    ||...|....|:         
plant   733 NEMEKEFEDCRNMNSSLIREL------DEIQAGLGRYLNFDQIQSNVVASSTRGAE--------- 782

  Fly   760 QEILQKQEQQLRSELEAEKRAALTKIEQERA-QHARDFEERLQCLELEQFKYKCNSEMLETERQA 823
                  |..|....|.||....:::|::|.| .|:::::..                        
plant   783 ------QVNQAHKHLMAETMPTISEIQEEVAISHSKNYDRG------------------------ 817

  Fly   824 LALAQQQEHTPLRHEDAVSTPAQKSTILEDIQRI-MLNPSEESLHKTQLMVKEATQRCRQ----- 882
             ||.:..|..     |......:...:::|::.. .||...|..||:||..:|..:..|:     
plant   818 -ALVKTDEGI-----DRSILQFKLGKLMKDLEEARTLNCKYEKDHKSQLSQQEDIEVVREQVETE 876

  Fly   883 ------------LDLPLEFRQ---TQTPDEFGLLRTVILILDKQRGLKAEWPTARLGVWLDLVRD 932
                        :.|..||::   ..|.:...:..|:.....:.|.|..:|..|.|.:...:|  
plant   877 TARTILELQEEVIALQSEFQRRICNLTEENQSIKDTITARESEIRALNQDWEKATLELTNFIV-- 939

  Fly   933 NAEQQEKLNATTIFQSVEVDWEPLDADLNETLSDTHNSSRIALNLSAMKD--VLLNKPLK--RLL 993
             |..:...||:|..:|:...:..::|.:.:.:      .:.|.|....::  :||.|.|:  |:|
plant   940 -AGSKSIKNASTQIESIICSFPQVNAWIGDYV------EKAAKNCIKKEETILLLQKSLEDARIL 997

  Fly   994 NASSS-KSNTPR-------------QTSTPSPGSQLVHFTKRLLTYDPEEIPESQSSFTTLVQQE 1044
            .|..: |.|:.:             ..:|......|.:...|:    .:|:...:|:|       
plant   998 VAEMNLKLNSLKGATIALNEFQLGGNAATTEEAFNLNNDVDRM----SDEVDTLESNF------- 1051

  Fly  1045 LQIMQRSAQRLRRHCEAALL-------ERENHQDNGVLAVSLQEALARMDTVLNGMHTSLARAEA 1102
             :..|.|..:..||.||||.       .|:.||    :...:|:...:....|:.:..||: ||.
plant  1052 -KANQYSILKTERHAEAALAVTKWLSDSRDQHQ----MMEKVQDQSVKEFGTLSSISASLS-AEG 1110

  Fly  1103 TACVT 1107
            .|.::
plant  1111 NADIS 1115

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nebNP_476817.1 KISc_KIF1A_KIF1B 119..525 CDD:276816 143/413 (35%)
KISc 120..525 CDD:214526 143/412 (35%)
Kinesin_assoc 524..657 CDD:292801 33/160 (21%)
FHA 634..740 CDD:238017 26/158 (16%)
POK1NP_001326049.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 252 1.000 Domainoid score I517
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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