DRSC/TRiP Functional Genomics Resources

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Protein Alignment neb and AT3G10180

DIOPT Version :10

Sequence 1:NP_476817.1 Gene:neb / 35293 FlyBaseID:FBgn0004374 Length:1121 Species:Drosophila melanogaster
Sequence 2:NP_187629.3 Gene:AT3G10180 / 820180 AraportID:AT3G10180 Length:1273 Species:Arabidopsis thaliana


Alignment Length:1115 Identity:273/1115 - (24%)
Similarity:442/1115 - (39%) Gaps:323/1115 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 VAVRVRPLNALECTRGQVTNVVQVHGNSNELTVQAGSSADASAGVTHFFSYDQVYYSCDPERKNF 187
            |:||.|||::.:..    |:..::  :|:.:.:...||.        .|.:|:::      |:: 
plant     6 VSVRARPLSSEDAK----TSPWKI--SSDSIFMPNHSSL--------AFEFDRIF------RED- 49

  Fly   188 ACQ-AKVFEGTARPLIDTAFEGYNACLFAYGQTGSGKSYSMMGIEALDDAALDGGPPHDEAGIIP 251
             |: .:|:|...:.::..|..|:|..:||||||.|||:::|.|...             |.|:||
plant    50 -CKTVQVYEARTKEIVSAAVRGFNGTVFAYGQTNSGKTHTMRGSPI-------------EPGVIP 100

  Fly   252 RFCHELFRRIEAVKSQQQLQVEVEVSYFEIYNEKIHDLLSVQHAAAATGESTPIQQQQQQQRPAL 316
            ...|:||..|....|::.|   :.:||.|||||.|:|||:.:|.                   .|
plant   101 LAVHDLFDTIYQDASREFL---LRMSYLEIYNEDINDLLAPEHR-------------------KL 143

  Fly   317 KVREHPIFGPYVVDLSAHSVDSYSALRNWLAVGNSQRATASTAMNDKSSRSHSIFNIVLNLTDLS 381
            ::.|:...|.:|..|....|.|...:...:..|.|.|....|.||..|||||:||.:::......
plant   144 QIHENLEKGIFVAGLREEIVASPQQVLEMMEFGESHRHIGETNMNLYSSRSHTIFRMIIESRQKM 208

  Fly   382 SDDGLSSDTDSSTASSLRQTRRSKISLVDLAGSERISVSGSNGERIREGVSINKSLLTLGKVIAA 446
            .|:|:.:..|:        .|.|.::|||||||||.:.:|:.|.|::||..|||||:|||.||..
plant   209 QDEGVGNSCDA--------VRVSVLNLVDLAGSERAAKTGAEGVRLKEGSHINKSLMTLGTVIKK 265

  Fly   447 LADSRKAIANGPLGSGTPSTFVPYRESVLTWLLRENLGGNSKTVMLATISPASIHADETLATLRY 511
            |::          |..|....||||:|.||.:|:..||||:.|.::..|:.|.||||||.::|::
plant   266 LSE----------GVETQGGHVPYRDSKLTRILQPALGGNANTAIICNITLAPIHADETKSSLQF 320

  Fly   512 ACKARSIVNRVKVNESPHD--------KIIRDLRAEVDRLKSLRNEYERQRRLSGNSNNPVPRKI 568
            |.:|..:.|...|||...|        |.|.:||:   :||:..:::..:..|  |..|.: .|.
plant   321 ASRALRVTNCAHVNEILTDAALLKRQKKEIEELRS---KLKTSHSDHSEEEIL--NLRNTL-LKS 379

  Fly   569 IIETSVDETEVEALRQQLAERERELSRAQK-----SWMEKLKEAEDQRKSE------------LR 616
            .:|......|:|..::..|:|||.|....|     |.|..|...:::|:.:            :.
plant   380 ELERERIALELEEEKKAQAQRERVLQEQAKKIKNLSSMVLLSNRDEKREQDHFKKGKRRDTWCIG 444

  Fly   617 VLKR------------RGLALELTAEQKQ-------ACLVNLTADPI----------LSGTL-FY 651
            .|.|            ||.:||....:::       :.|||   :|:          :.||| ..
plant   445 KLSRDSTSEDQSNVLSRGSSLESARSERETGPLLPFSELVN---EPLYNINEEDEDSIEGTLEDS 506

  Fly   652 LLPQ--GLVRIGRGRLPGGSSSSQPDIVLDGPLVA---LQHCSIEHERGGKLYVIPGSEDFETYV 711
            :||.  .||.:        :|..:|.|....|:|.   |.....|:|   .|.:...:|...:.:
plant   507 VLPDPCALVNV--------TSRKKPSIKQKNPVVVENELDRIQREYE---ALLLQYETERIISEI 560

  Fly   712 NGELLKDR--RQLFHGDRL-----VIGGSHYFRISNPFCSQRGKADHPVDFQLAHQEILQKQEQQ 769
            ..|.||.:  .....||..     |:|..|        |.     :|.|:.:.....:|.||.|:
plant   561 QIECLKVKLGEDGLSGDAKCKQSEVVGNVH--------CE-----EHVVNLRDPEAILLIKQLQE 612

  Fly   770 LRSELEAEK---------------------RAALTKIEQ------ERAQHARD------------ 795
            ..:.||.||                     |....:|::      |.||.||:            
plant   613 KINMLELEKSSSNRNLDDLVMVATEQNICAREKFAEIQEEIHAAREEAQVAREQLVSKESEVIDV 677

  Fly   796 ----------FEERLQCLELEQFKYKCNSEMLETERQALALAQQQEHTPLRHE------------ 838
                      ....::.||.|..|||.:.|.:.:.... .|......:||.|:            
plant   678 INENFNSLVNVATEIEVLESEFQKYKASVETISSVMNE-GLQDFAFFSPLIHDFTLFVRQSSEQH 741

  Fly   839 -------DAVSTPAQKSTILEDIQRIMLNPSEESLHKTQLMVKEATQRCRQLDLPLEFRQTQTPD 896
                   ..|.:..:|..:..:.::::|   :|.....|..::|..|..::.:..|:........
plant   742 DSLINSYQTVQSSLKKKVLDVENEKLLL---QEQCAGLQSQIEELNQEAQKHETSLKMLSEHHES 803

  Fly   897 EFGLLRTVILILDKQRGLKAEWPTARLGVWLDLVRDNAEQQEKLNATTIFQSVEVDWEPLDADLN 961
            |...|.:.|..|:|..|..:....|:               ||       :::..|:|.....|.
plant   804 ERSDLLSHIECLEKDIGSLSSSSLAK---------------EK-------ENLRKDFEKTKTKLK 846

  Fly   962 ETLSDTHNSSRIALNLSAMKDVLLNKPLKRLLNASSSKSNTPRQTSTPSPGSQLVHFTKRLLTYD 1026
            :|.|...||.:....|.|.| ....:.||||                        |..|.||..|
plant   847 DTESKLKNSMQDKTKLEAEK-ASAERELKRL------------------------HSQKALLERD 886

  Fly  1027 PEEIPESQSSFTTLVQQELQIMQRSAQRLRRHCEAALLERENHQDNGVLAVSLQEALARMDTVLN 1091
            ..:    |.||              |.:.|   ::.|:||..:|       ||||...:::.:..
plant   887 ISK----QESF--------------AGKRR---DSLLVERSANQ-------SLQEEFKQLEVLAF 923

  Fly  1092 GMHTSLARAE 1101
            .|.|::|..|
plant   924 EMETTIASLE 933

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nebNP_476817.1 KISc_KIF1A_KIF1B 119..525 CDD:276816 129/402 (32%)
SMC_N 514..>615 CDD:481474 29/125 (23%)
FHA_KIF14 627..741 CDD:438759 29/143 (20%)
AT3G10180NP_187629.3 KISc_CENP_E 4..327 CDD:276825 128/395 (32%)
sbcc <335..904 CDD:129705 131/673 (19%)
SMC_prok_B 644..>1268 CDD:274008 70/369 (19%)

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