DRSC/TRiP Functional Genomics Resources

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Protein Alignment neb and AT2G21300

DIOPT Version :10

Sequence 1:NP_476817.1 Gene:neb / 35293 FlyBaseID:FBgn0004374 Length:1121 Species:Drosophila melanogaster
Sequence 2:NP_179726.2 Gene:AT2G21300 / 816669 AraportID:AT2G21300 Length:862 Species:Arabidopsis thaliana


Alignment Length:249 Identity:51/249 - (20%)
Similarity:85/249 - (34%) Gaps:90/249 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 FLGLGSKLSP-----------ITVKEETNEDSAPSRGMMDWSF--SSKVG--------------- 41
            :|||.:.||.           :.:.:|...|.|........||  |.|:|               
plant   109 YLGLFTHLSRQCKMIFNQTSILNLLKEEKYDIAVIDSFNPCSFLASEKLGIPFIATHPFAVKSPW 173

  Fly    42 -SG-PQFLSFGTSQQETRVNTVNDHL------------LSSAAMDQNQRTYFSSLQEDRVFPGSS 92
             || |..||...:.|    :.::||:            :.||.::....:.|..:.|:. ||..|
plant   174 HSGIPNLLSIMPAYQ----SQLSDHMNFFERVKNVFFYIDSAVLEYKIHSLFDDVIEEH-FPVGS 233

  Fly    93 QQD-------------QTTITVSMSEPNYINSFINHQHLGGSPIMAPPVSVFPAPTTIRSSSKPL 144
            :..             .|..|:..  |:..  |.|..::||  ::|.|             :||:
plant   234 RPSFAELYKKAALWMYNTDFTIEF--PHAF--FPNVLYIGG--VLAKP-------------AKPV 279

  Fly   145 PPQLTIFYA-----GSVLV-YQDIAPEKAQAIMLLAGNGPHAKPVSQPKPQKLV 192
            ..:|..|.:     |.:|| :..:.|.......:...|...||     .|||::
plant   280 SQELEHFISQSGEHGFILVTFGSMIPSNPLTEFVKEMNDGFAK-----IPQKVI 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nebNP_476817.1 KISc_KIF1A_KIF1B 119..525 CDD:276816 18/80 (23%)
SMC_N 514..>615 CDD:481474
FHA_KIF14 627..741 CDD:438759
AT2G21300NP_179726.2 KISc_CENP_E 24..346 CDD:276825 51/249 (20%)
DUF3490 684..844 CDD:463424
Blue background indicates that the domain is not in the aligned region.

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