DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment neb and si:dkey-26i13.8

DIOPT Version :9

Sequence 1:NP_476817.1 Gene:neb / 35293 FlyBaseID:FBgn0004374 Length:1121 Species:Drosophila melanogaster
Sequence 2:XP_001337836.4 Gene:si:dkey-26i13.8 / 797363 ZFINID:ZDB-GENE-090312-134 Length:991 Species:Danio rerio


Alignment Length:1029 Identity:262/1029 - (25%)
Similarity:422/1029 - (41%) Gaps:286/1029 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 ESNMIVAVRVRPLNALECTRGQVTNVVQVHGNSNELTVQAGSSADASAGVTHFFSYDQVY----- 177
            :..:.||:|:||||..|...|.   .:..|...|::.|......|:...:....|.::.|     
Zfish    10 DHQLTVALRIRPLNEAEIEEGA---TIVAHKIDNQMVVLMDPCEDSDNVLRAHRSREKTYMFDLA 71

  Fly   178 --YSCDPERKNFACQAKVFEGTARPLIDTAFEGYNACLFAYGQTGSGKSYSMMGIEALDDAALDG 240
              |:        |.|..|:..|.:.|||....||||.:||||.||:||:::|:|:::        
Zfish    72 FDYT--------ATQEDVYVATTKNLIDGVIAGYNATVFAYGPTGAGKTHTMLGLDS-------- 120

  Fly   241 GPPHDEAGIIPRFCHELFRRIEAVKSQQQLQVEVEVSYFEIYNEKIHDLLSVQHAAAATGESTPI 305
                 |.||..|..::|||.||  .|.:.|...|.:||.|||||.|.|||:         .|:..
Zfish   121 -----EPGIYIRTLNDLFRAIE--DSTEDLDCSVYMSYIEIYNEMIRDLLN---------PSSGY 169

  Fly   306 QQQQQQQRPALKVREHPIFGPYVVDLSAHSVDSYSALRNWLAVGNSQRATASTAMNDKSSRSHSI 370
            .:.::..:..:::..       :.:.|..:.....||   |..||.||...|||.|..|||||:|
Zfish   170 LELREDGKGEIRIAG-------ITEFSTCNAKEIMAL---LTKGNKQRTQESTAANKTSSRSHAI 224

  Fly   371 FNIVLNLTDLSSDDGLSSDTDSSTASSLRQTRRSKISLVDLAGSERISVSGSNGERIREGVSINK 435
            ..:.:.......|..             .:.|..|:.:|||||:||.|.:.:.|:|::||..||:
Zfish   225 LQVTVKQKSRVKDIN-------------EEVRVGKLFMVDLAGTERASQTQNRGKRMKEGAHINR 276

  Fly   436 SLLTLGKVIAALADSRKAIANGPLGSGTPSTFVPYRESVLTWLLRENLGGNSKTVMLATISPASI 500
            |||.|...|.||::.          .|..:.||.||:|.||.||::.|||||:|||:..|||||.
Zfish   277 SLLALANCINALSEK----------GGKGAQFVNYRDSKLTRLLKDALGGNSRTVMITHISPASS 331

  Fly   501 HADETLATLRYACKARSIVNRVK---VNESPH----DKIIRDLRAEVDRLKSLRNEYERQRRLSG 558
            :.:|:..||.||.||::|..:||   :|.|.|    .:||.|||:|::||:: :.:.:.|.:|.|
Zfish   332 NFEESRNTLVYADKAKNIRTKVKRNLMNVSYHLAQYTRIIADLRSEIERLRA-KIDQQSQDQLKG 395

  Fly   559 NSNNPVPRKIIIET-SVDETEVEALRQQLAERERELSRAQKSWMEKLKEAEDQRKSELRVLKRRG 622
            ...:  .|.|..|. .....|:..|::||....||....::|.||.     :....||.:...|.
Zfish   396 EKAD--IRNIQAEVQQYSHGEMALLQEQLLSAFREQMEIRRSLMEL-----ENCNMELHIDTSRH 453

  Fly   623 LALELTAEQKQACLVNLTADPILSGTLFYLLPQGLVRIGRGRLPGGSSSSQPDIVLDGPLVALQH 687
            |......|:.:|                           |.|......|.|.           :|
Zfish   454 LLTISDWERDRA---------------------------RARREKDELSGQK-----------KH 480

  Fly   688 CSIEHERGGKLYVIPGSEDFETYVNGELLKDRRQLFHGDRLVIGGSHYFRISNPFCSQRGKADHP 752
            ...|.|:                   |.:.:..|.....|..||         |..::       
Zfish   481 TDKEEEQ-------------------ESMPEEPQYVTAAREEIG---------PLLAE------- 510

  Fly   753 VDFQLAHQEILQKQEQQLRSELEAEK----RAALTKIEQERAQHARDFEER----LQC----LEL 805
                       |::..:|:.||| ||    :...:|||:...:...:.|:|    |.|    |||
Zfish   511 -----------QRKTMELKRELE-EKLLNMKLKSSKIEELLPKRISNTEQRDILMLLCKVHELEL 563

  Fly   806 EQFKYKCNSEMLETERQALALAQQQEHTPLRHED-AVSTPAQKSTILEDIQRIMLNPSEESLHKT 869
            |           :||.|:..|.::   ..||.:| .:....|:.|:.:||           :|:.
Zfish   564 E-----------KTEIQSAVLCKE---NVLRTKDFIIQRHEQQRTLCDDI-----------IHQQ 603

  Fly   870 QLMVKEATQRCRQLDLPLEFRQTQTPDEFGLLRTVILILDKQRGLKAEWPTARLG---VWLDLVR 931
            ::::::     :.|.:| |..|......||.|...  |:|:...|.. :.|..|.   :.||:: 
Zfish   604 KMLIED-----QGLCVP-EGLQELYSLYFGELSDG--IIDQILNLHT-FTTNNLNARQLRLDVI- 658

  Fly   932 DNAEQQEKLNATTIFQSVEVDWEPLDADLNETLSD----THNSSRIALNLSAMKDVLLNKPLKRL 992
            .|.|:.:|.      :...|.:.|||....::.|.    ..:::|:..:||.:|.       :|.
Zfish   659 SNLEEADKA------EQSNVKFSPLDKHPRDSSSSGLDYDSDTNRVFKSLSKIKP-------RRQ 710

  Fly   993 LNASSS----------KSNTP-RQTSTPSPGSQLVHFTKRLLTYDPEEIPESQSSFTTLVQQELQ 1046
            .::|||          |.:|| ..|.:.||.      |.|      |.:.:::|......::..:
Zfish   711 HHSSSSQTLMRKVCAVKDSTPICPTESVSPD------TLR------EIVSDTKSISVIAAKRRSR 763

  Fly  1047 IMQRSAQRLRRHCEAALLE-------------------RENHQDNGVLAVSLQE 1081
            :..:|..|:.....||.|:                   |.:||.:|..:.|.|:
Zfish   764 LQAKSNSRMAGMGLAAGLKSSVSMDSLVSTLPDESAEVRRSHQRHGGSSQSKQD 817

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nebNP_476817.1 KISc_KIF1A_KIF1B 119..525 CDD:276816 136/415 (33%)
KISc 120..525 CDD:214526 136/414 (33%)
Kinesin_assoc 524..657 CDD:292801 32/137 (23%)
FHA 634..740 CDD:238017 13/105 (12%)
si:dkey-26i13.8XP_001337836.4 KISc 12..356 CDD:214526 136/411 (33%)
KISc_KIP3_like 12..349 CDD:276821 133/404 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.