DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment neb and si:dkey-26i13.8

DIOPT Version :10

Sequence 1:NP_476817.1 Gene:neb / 35293 FlyBaseID:FBgn0004374 Length:1121 Species:Drosophila melanogaster
Sequence 2:XP_009304780.1 Gene:si:dkey-26i13.8 / 797363 ZFINID:ZDB-GENE-090312-134 Length:991 Species:Danio rerio


Alignment Length:1029 Identity:262/1029 - (25%)
Similarity:422/1029 - (41%) Gaps:286/1029 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 ESNMIVAVRVRPLNALECTRGQVTNVVQVHGNSNELTVQAGSSADASAGVTHFFSYDQVY----- 177
            :..:.||:|:||||..|...|.   .:..|...|::.|......|:...:....|.::.|     
Zfish    10 DHQLTVALRIRPLNEAEIEEGA---TIVAHKIDNQMVVLMDPCEDSDNVLRAHRSREKTYMFDLA 71

  Fly   178 --YSCDPERKNFACQAKVFEGTARPLIDTAFEGYNACLFAYGQTGSGKSYSMMGIEALDDAALDG 240
              |:        |.|..|:..|.:.|||....||||.:||||.||:||:::|:|:::        
Zfish    72 FDYT--------ATQEDVYVATTKNLIDGVIAGYNATVFAYGPTGAGKTHTMLGLDS-------- 120

  Fly   241 GPPHDEAGIIPRFCHELFRRIEAVKSQQQLQVEVEVSYFEIYNEKIHDLLSVQHAAAATGESTPI 305
                 |.||..|..::|||.||  .|.:.|...|.:||.|||||.|.|||:         .|:..
Zfish   121 -----EPGIYIRTLNDLFRAIE--DSTEDLDCSVYMSYIEIYNEMIRDLLN---------PSSGY 169

  Fly   306 QQQQQQQRPALKVREHPIFGPYVVDLSAHSVDSYSALRNWLAVGNSQRATASTAMNDKSSRSHSI 370
            .:.::..:..:::..       :.:.|..:.....||   |..||.||...|||.|..|||||:|
Zfish   170 LELREDGKGEIRIAG-------ITEFSTCNAKEIMAL---LTKGNKQRTQESTAANKTSSRSHAI 224

  Fly   371 FNIVLNLTDLSSDDGLSSDTDSSTASSLRQTRRSKISLVDLAGSERISVSGSNGERIREGVSINK 435
            ..:.:.......|..             .:.|..|:.:|||||:||.|.:.:.|:|::||..||:
Zfish   225 LQVTVKQKSRVKDIN-------------EEVRVGKLFMVDLAGTERASQTQNRGKRMKEGAHINR 276

  Fly   436 SLLTLGKVIAALADSRKAIANGPLGSGTPSTFVPYRESVLTWLLRENLGGNSKTVMLATISPASI 500
            |||.|...|.||::.          .|..:.||.||:|.||.||::.|||||:|||:..|||||.
Zfish   277 SLLALANCINALSEK----------GGKGAQFVNYRDSKLTRLLKDALGGNSRTVMITHISPASS 331

  Fly   501 HADETLATLRYACKARSIVNRVK---VNESPH----DKIIRDLRAEVDRLKSLRNEYERQRRLSG 558
            :.:|:..||.||.||::|..:||   :|.|.|    .:||.|||:|::||:: :.:.:.|.:|.|
Zfish   332 NFEESRNTLVYADKAKNIRTKVKRNLMNVSYHLAQYTRIIADLRSEIERLRA-KIDQQSQDQLKG 395

  Fly   559 NSNNPVPRKIIIET-SVDETEVEALRQQLAERERELSRAQKSWMEKLKEAEDQRKSELRVLKRRG 622
            ...:  .|.|..|. .....|:..|::||....||....::|.||.     :....||.:...|.
Zfish   396 EKAD--IRNIQAEVQQYSHGEMALLQEQLLSAFREQMEIRRSLMEL-----ENCNMELHIDTSRH 453

  Fly   623 LALELTAEQKQACLVNLTADPILSGTLFYLLPQGLVRIGRGRLPGGSSSSQPDIVLDGPLVALQH 687
            |......|:.:|                           |.|......|.|.           :|
Zfish   454 LLTISDWERDRA---------------------------RARREKDELSGQK-----------KH 480

  Fly   688 CSIEHERGGKLYVIPGSEDFETYVNGELLKDRRQLFHGDRLVIGGSHYFRISNPFCSQRGKADHP 752
            ...|.|:                   |.:.:..|.....|..||         |..::       
Zfish   481 TDKEEEQ-------------------ESMPEEPQYVTAAREEIG---------PLLAE------- 510

  Fly   753 VDFQLAHQEILQKQEQQLRSELEAEK----RAALTKIEQERAQHARDFEER----LQC----LEL 805
                       |::..:|:.||| ||    :...:|||:...:...:.|:|    |.|    |||
Zfish   511 -----------QRKTMELKRELE-EKLLNMKLKSSKIEELLPKRISNTEQRDILMLLCKVHELEL 563

  Fly   806 EQFKYKCNSEMLETERQALALAQQQEHTPLRHED-AVSTPAQKSTILEDIQRIMLNPSEESLHKT 869
            |           :||.|:..|.::   ..||.:| .:....|:.|:.:||           :|:.
Zfish   564 E-----------KTEIQSAVLCKE---NVLRTKDFIIQRHEQQRTLCDDI-----------IHQQ 603

  Fly   870 QLMVKEATQRCRQLDLPLEFRQTQTPDEFGLLRTVILILDKQRGLKAEWPTARLG---VWLDLVR 931
            ::::::     :.|.:| |..|......||.|...  |:|:...|.. :.|..|.   :.||:: 
Zfish   604 KMLIED-----QGLCVP-EGLQELYSLYFGELSDG--IIDQILNLHT-FTTNNLNARQLRLDVI- 658

  Fly   932 DNAEQQEKLNATTIFQSVEVDWEPLDADLNETLSD----THNSSRIALNLSAMKDVLLNKPLKRL 992
            .|.|:.:|.      :...|.:.|||....::.|.    ..:::|:..:||.:|.       :|.
Zfish   659 SNLEEADKA------EQSNVKFSPLDKHPRDSSSSGLDYDSDTNRVFKSLSKIKP-------RRQ 710

  Fly   993 LNASSS----------KSNTP-RQTSTPSPGSQLVHFTKRLLTYDPEEIPESQSSFTTLVQQELQ 1046
            .::|||          |.:|| ..|.:.||.      |.|      |.:.:::|......::..:
Zfish   711 HHSSSSQTLMRKVCAVKDSTPICPTESVSPD------TLR------EIVSDTKSISVIAAKRRSR 763

  Fly  1047 IMQRSAQRLRRHCEAALLE-------------------RENHQDNGVLAVSLQE 1081
            :..:|..|:.....||.|:                   |.:||.:|..:.|.|:
Zfish   764 LQAKSNSRMAGMGLAAGLKSSVSMDSLVSTLPDESAEVRRSHQRHGGSSQSKQD 817

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nebNP_476817.1 KISc_KIF1A_KIF1B 119..525 CDD:276816 136/415 (33%)
SMC_N 514..>615 CDD:481474 31/108 (29%)
FHA_KIF14 627..741 CDD:438759 14/113 (12%)
si:dkey-26i13.8XP_009304780.1 KISc_KIP3_like 12..349 CDD:276821 133/404 (33%)

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