DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment neb and Kif18b

DIOPT Version :9

Sequence 1:NP_476817.1 Gene:neb / 35293 FlyBaseID:FBgn0004374 Length:1121 Species:Drosophila melanogaster
Sequence 2:NP_932063.2 Gene:Kif18b / 70218 MGIID:2446979 Length:834 Species:Mus musculus


Alignment Length:992 Identity:257/992 - (25%)
Similarity:383/992 - (38%) Gaps:283/992 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 EESNMIVAVRVRP--LNALECTRGQVTNVV----------QVHGNSNELTVQAGSSADASAGVTH 169
            |:|.:.|.|||||  ...||..|..|..||          :..|....|......:.....|...
Mouse     6 EDSVVRVVVRVRPPTPKELESQRRPVIQVVDERMLVFDPEECDGGFPGLKWSGSHNGPKKKGKDL 70

  Fly   170 FFSYDQVYYSCDPERKNFACQAKVFEGTARPLIDTAFEGYNACLFAYGQTGSGKSYSMMGIEALD 234
            .|.:|:|:       ...|.|..||:.|...::|:..:|||..:||||.||:||:::|:|.|.  
Mouse    71 TFVFDRVF-------GEMATQEDVFQHTTHNILDSFLQGYNCSVFAYGATGAGKTHTMLGREG-- 126

  Fly   235 DAALDGGPPHDEAGIIPRFCHELFRRIEAVKSQQQLQVEVEVSYFEIYNEKIHDLLSVQHAAAAT 299
                       |.||:.....||:||:||  .|::.|.||.:||.|:|||:|||||         
Mouse   127 -----------EPGIMYLTTMELYRRLEA--RQEEKQFEVLISYLEVYNEQIHDLL--------- 169

  Fly   300 GESTPIQQQQQQQRPALKVREHPIFGPYVVDLSAHSVDSYSALRNWLAVGNSQRATASTAMNDKS 364
                       :.:..|.:||.|..|..|..||.|...|...|...|..||..|....|..|..|
Mouse   170 -----------EPKGPLTIREDPDKGVVVPGLSFHQPASAEQLLEMLTRGNCSRTQHPTDANATS 223

  Fly   365 SRSHSIFNIVLNLTDLSSDDGLSSDTDSSTASSLRQTRR-SKISLVDLAGSERISVSGSNGERIR 428
            ||||:||.|.:...|              ....|.|..| :|:||:|||||||.|.:.:.|||:|
Mouse   224 SRSHAIFQIFVKQQD--------------RVPGLTQALRVAKMSLIDLAGSERASSTHAKGERLR 274

  Fly   429 EGVSINKSLLTLGKVIAALADSRKAIANGPLGSGTPSTFVPYRESVLTWLLRENLGGNSKTVMLA 493
            ||.:||:|||.|..|:.||||::          |..| .||||:|.||.||::::|||.:|||:|
Mouse   275 EGANINRSLLALINVLNALADAK----------GRKS-HVPYRDSKLTRLLKDSIGGNCRTVMIA 328

  Fly   494 TISPASIHADETLATLRYACKARSIVNRVKVNE-------SPHDKIIRDLRAEVDRLKSLRNEYE 551
            .|||:|:..::|..||:||.:|:.|...:|.|.       |.:..|.:.|:|||..|:.....| 
Mouse   329 AISPSSLTYEDTYNTLKYADRAKEIRLTLKSNVISVDHHISQYATICQQLQAEVAFLREKLQMY- 392

  Fly   552 RQRRLSGNSNNPVPRKIIIETSVDETEVEALRQQLAERERELSRAQKSWMEKLKEAEDQRKSEL- 615
                                    |...:||:||.:.:...||..|......|:.....:.|.| 
Mouse   393 ------------------------EAGAQALQQQCSPQPPTLSIPQSLSSSSLQPGPSSQSSTLE 433

  Fly   616 -----RVLKRRGLA--------LELTAEQKQAC-----LVNLTADPILSGTLFYLLPQGLVRIGR 662
                 ..|:...|.        :|.:|.:::.|     ......:|.|.|:     |...|:...
Mouse   434 CHAKNETLQEESLGSDAQGQEIVEESASEQEQCPQDKQCPTQKPEPNLPGS-----PSPSVQAKP 493

  Fly   663 GRLPGGSSSSQPDIVLDGPLVALQHCSIEHERGGKLY--------VIPGSEDFETYVNGELLKDR 719
            |.   |..|.|.........:|||...:...:...|.        :|...|..:..|..|.:..|
Mouse   494 GT---GQHSPQKQDADHSKQLALQVLRLAQRQYSLLQAANLLTPDMISEFETLQQLVLEESVDHR 555

  Fly   720 RQ------LFHGDRLVIGGSHYFRISNPFCSQRGKADH--PVDFQLAHQ---------------- 760
            .:      |..||.|          :...||:...:.:  ||...:|.|                
Mouse   556 AESPRSPALARGDPL----------AQALCSESKSSGYCGPVTRTMAKQLNGLTHTLGAPLAPDC 610

  Fly   761 ---EILQKQEQQLRSELEAEKRAALTKIEQERAQHARDFEERLQCLELEQFKYKCNSEMLETERQ 822
               :..||..::.:.:|..|:..:|.....|..:..:.|   |.||                .|.
Mouse   611 TSDKTFQKPTKEKKRKLTPEEPGSLPAPNLEMKRQRQSF---LPCL----------------RRG 656

  Fly   823 ALALAQ--QQEHTPLRHEDAVSTPAQK---STILEDIQRIMLNPSEESLHKTQLMVKEATQRCRQ 882
            :|..||  .:..||.|...:..:|:.:   :|:::  .|:.|.||             |.|.|  
Mouse   657 SLPKAQPCSEPRTPKRERASSPSPSSRVCPATVIK--SRVPLGPS-------------ALQNC-- 704

  Fly   883 LDLPLEFRQTQTPDEFGLLRTVILILDKQRGLKAEWPTARLGVWLDLVRDNAEQQEKLNATTIFQ 947
                      .||          |.|          ||..|....::..::..:..       ||
Mouse   705 ----------STP----------LAL----------PTRDLNTTFNVSEESPSKPS-------FQ 732

  Fly   948 SVEVDWEPLDADLNETLSDTHNSSRIAL----------NLSAMKDVLLNKP--------LKRLLN 994
            .. ||||.:..:||.|......|:.:.:          .::|.|.....:|        :.||.:
Mouse   733 EF-VDWEKVSPELNSTDQPFLPSAPVFIFTKGRKPSLPAVTASKKRRTMRPSVSRGRSCIARLHS 796

  Fly   995 ASSSKSNTPRQTSTPSP 1011
            ::..|.|.|  .:.|.|
Mouse   797 STLKKPNRP--FTVPEP 811

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nebNP_476817.1 KISc_KIF1A_KIF1B 119..525 CDD:276816 150/418 (36%)
KISc 120..525 CDD:214526 149/417 (36%)
Kinesin_assoc 524..657 CDD:292801 29/158 (18%)
FHA 634..740 CDD:238017 23/124 (19%)
Kif18bNP_932063.2 KISc_KIP3_like 18..353 CDD:276821 142/401 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 400..508 22/115 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 602..642 5/39 (13%)
Nuclear localization signal. /evidence=ECO:0000250 619..627 0/7 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 655..686 8/30 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 800..834 5/14 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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