DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment neb and Stard9

DIOPT Version :9

Sequence 1:NP_476817.1 Gene:neb / 35293 FlyBaseID:FBgn0004374 Length:1121 Species:Drosophila melanogaster
Sequence 2:XP_036018388.1 Gene:Stard9 / 668880 MGIID:3045258 Length:4598 Species:Mus musculus


Alignment Length:1125 Identity:303/1125 - (26%)
Similarity:462/1125 - (41%) Gaps:292/1125 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 SNMIVAVRVRPLNALECTRGQVTNVVQVHGNSNELTVQAGSSADASAGVTH----FFSYDQVYYS 179
            :|:.||||||||:..|...|. ..:|:|.....::......|...|.|.|.    .|.:|..|:|
Mouse     2 ANVQVAVRVRPLSKRETKEGG-RIIVEVDDKVAKIRNVKVDSRPESFGDTREKVVAFGFDYCYWS 65

  Fly   180 CDPERKNFACQAKVFEGTARPLIDTAFEGYNACLFAYGQTGSGKSYSMMGIEALDDAALDGGPPH 244
            .:||..::|.|..||......::..|.:|||.||||||||||||:|:|:|..|            
Mouse    66 VNPEDPHYASQEVVFRDLGTEVLSGAAKGYNICLFAYGQTGSGKTYTMLGTPA------------ 118

  Fly   245 DEAGIIPRFCHELFRRIEAVKSQQQLQVEVEVSYFEIYNEKIHDLLSVQHAAAATGESTPIQQQQ 309
             ..|:.||.|..||.|.:...| |.....::||:.|||||::.|||               :|..
Mouse   119 -SVGLTPRICEGLFIREDDCAS-QPCSRSIKVSFLEIYNERVRDLL---------------KQSN 166

  Fly   310 QQQRPALKVREHPIFGPYVVDLSAHSVDSYSALRNWLAVGNSQRATASTAMNDKSSRSHSIFNIV 374
            |.:...|:|||||..||||..||.|.|.:|..:...|..|.:.|.||:|.:::.|||||:||.| 
Mouse   167 QNKSYTLRVREHPEMGPYVQGLSQHVVTNYQQVIQLLEAGIANRITAATHVHEASSRSHAIFTI- 230

  Fly   375 LNLTDLSSDDGLSSDTDSSTASSLRQTRRSKISLVDLAGSERISVSGSNGERIREGVSINKSLLT 439
             :.|.....:.|.|:|            .|||:|||||||||...|... :||.||.:|||||:|
Mouse   231 -HCTQAILQNNLPSET------------ASKINLVDLAGSERADPSYCK-DRITEGANINKSLVT 281

  Fly   440 LGKVIAALA---------DSRKAIANGPLGSGTPST---------------FVPYRESVLTWLLR 480
            ||.||:.||         .|..:.|:....||.|||               ::|||:|||||||:
Mouse   282 LGIVISTLAQNSQVFSSCQSLSSAASSGGDSGVPSTTSGASSGGGPARRQSYIPYRDSVLTWLLK 346

  Fly   481 ENLGGNSKTVMLATISPASIHADETLATLRYACKARSIVNRVKVNESPHDKIIRDLRAEVDRLKS 545
            |:|||||||:|:||:|||.....||::|:|||..|::|:|:.:|||..:.|:||:||.|::|||:
Mouse   347 ESLGGNSKTIMVATVSPAHTSYSETMSTMRYASNAKNIINKPRVNEDANVKLIRELREEIERLKA 411

  Fly   546 LRNEYERQRRLSGNSNNPVPRKIIIETSVDETEVEALRQQLAERERELSRAQKSWMEKLKEAEDQ 610
            :...:|.:...|.|               |:.: |:|::.:.:.:.::....:.|.||       
Mouse   412 VLLNFELRNFSSLN---------------DDLD-ESLQELVFQSDLKIDTLTQHWTEK------- 453

  Fly   611 RKSELRVLKRRGLAL-----ELTAEQKQACLVNLTADPILSGTLFYLLPQGLVRIGRGRLPGGSS 670
            |.....:::..|:.:     .:..:.....|:.|..|.:.:|.:.|.|.:|..:|||     ..|
Mouse   454 RNDRQALMEHYGVDINRKRARVVIDSSLPHLMALEDDVLSTGVVLYHLKEGTTKIGR-----IDS 513

  Fly   671 SSQPDIVLDGPLVALQHCSIEHERGGKLYVIPGSEDFETYVNGELLKDRRQLFHGDRLVIGGSHY 735
            ..:.||||.|..:...||:|....|  :.::..::.....|||      |::....||..|..  
Mouse   514 DQEQDIVLQGQWIERDHCTITSTCG--VVILRPTQGARCTVNG------REVTASCRLTQGRD-- 568

  Fly   736 FRISNPFC----------SQRGKADHPVDFQLAHQEILQKQEQ----------QLRSELEAEKRA 780
            :.:::.:|          :|:.:.:||.:..:...:.|:..|.          .|..::.|.:..
Mouse   569 YGLNSGWCVTGAVITLGKAQKFRFNHPAEAAVLRHQRLKVGEALGSSGSLEWLDLDGDVSASRLG 633

  Fly   781 ALTKIEQERAQHARDFEERLQCLELEQFKYKCNSEMLETERQALALAQQQEHTPLRHEDAVSTPA 845
            ....:.:||    |..||  ||                          .::..|.||.: :...|
Mouse   634 LCPVLRKER----RVLEE--QC--------------------------DRDQQPSRHSE-IPYRA 665

  Fly   846 QKSTILEDIQRIMLNPSEESLHKTQL--MVKEATQRCRQLDLPLEFRQTQTPDEFGLLRTVILIL 908
            |              |.::..|...|  ..||...|.::   .||...|....:         |.
Mouse   666 Q--------------PEQQQCHVEALKQQAKEGQSRVQK---ELELDHTHISQQ---------IK 704

  Fly   909 DKQRGLKAEWPTARLGVWLDLVRD-----NAEQQEKLNATTIFQSVEVD-WEPLDAD-------- 959
            |.|:.|..|      ..||..:|:     |..::::|.|     ||..| |.|....        
Mouse   705 DNQQWLLTE------ETWLASLRETQQEGNCGEEKELEA-----SVAPDAWLPTVPQTPPSPLVQ 758

  Fly   960 -----LNETLSDTHNSSRIALNLSAMK-----DVLLNKPLKRLLNA--------------SSSKS 1000
                 :....|..|.:.....|:...|     :.::.|  :|||.|              ....|
Mouse   759 SQKRVVQPQCSPRHTTRATVWNIRQKKVSFQLERIIKK--RRLLEAQRRLEQLSTFFWIQDDGAS 821

  Fly  1001 NTP---RQTSTPSPGSQ--------------------LVHFTKRLLTYDPEEIPESQSSFTTLVQ 1042
            ..|   ..::|..||||                    |.......:.:||..:.......|    
Mouse   822 RAPSWASSSNTSGPGSQRRSRWTTCSSLSLQRLGCRRLPQLHSDFMNWDPSAMSPPVPELT---- 882

  Fly  1043 QELQIMQRSAQRLRRHC---EAALLERENHQDNGVLAVSLQEALARMDTVLNGMHTSLARAEATA 1104
                 .|...:.|...|   :|..|.|.:...:.....|.....:...|.|...|.|::..|..:
Mouse   883 -----HQMPEKTLSTDCIPPKAGRLGRNSFHSSRWRKFSPARRASTQGTHLTVSHKSVSSQEIES 942

  Fly  1105 CVTSP---------TKTQKA 1115
            ....|         ||.|||
Mouse   943 LGKQPCQMSSQGQSTKKQKA 962

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nebNP_476817.1 KISc_KIF1A_KIF1B 119..525 CDD:276816 170/433 (39%)
KISc 120..525 CDD:214526 170/432 (39%)
Kinesin_assoc 524..657 CDD:292801 29/137 (21%)
FHA 634..740 CDD:238017 27/105 (26%)
Stard9XP_036018388.1 KISc_KIF1A_KIF1B 2..391 CDD:276816 170/433 (39%)
Kinesin_assoc 390..504 CDD:406567 29/136 (21%)
FHA 481..594 CDD:238017 29/127 (23%)
SRPBCC 4394..4598 CDD:417480
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D123768at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.