DRSC/TRiP Functional Genomics Resources

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Protein Alignment neb and kif11

DIOPT Version :10

Sequence 1:NP_476817.1 Gene:neb / 35293 FlyBaseID:FBgn0004374 Length:1121 Species:Drosophila melanogaster
Sequence 2:NP_001016116.2 Gene:kif11 / 548870 XenbaseID:XB-GENE-978999 Length:1067 Species:Xenopus tropicalis


Alignment Length:1133 Identity:287/1133 - (25%)
Similarity:467/1133 - (41%) Gaps:307/1133 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 NMIVAVRVRPLNALECTRGQVTNVVQVHGNSNELTVQAGSSADASAGVTHFFSYDQVYYSCDPER 184
            |:.|.||.||.|.|| .:....:|::......|:.|:.|...|.....|  :::|.|:   .|..
 Frog    18 NIQVVVRCRPFNQLE-RKASSHSVLECDAPRKEVCVRTGGINDKLGKKT--YTFDMVF---GPAA 76

  Fly   185 KNFACQAKVFEGTARPLIDTAFEGYNACLFAYGQTGSGKSYSMMGIEALDDAALDGGPPHDEAGI 249
            |    |..|:.....|::|....|||..:|||||||:||:::|.|..:.|:.......|  .|||
 Frog    77 K----QIDVYRSVVCPILDEVIMGYNCTVFAYGQTGTGKTFTMEGERSADEEFTWEQDP--LAGI 135

  Fly   250 IPRFCHELFRRIEAVKSQQQLQVEVEVSYFEIYNEKIHDLLSVQHAAAATGESTPIQQQQQQQRP 314
            |||..|::|.::    |:...:..|:||..|||||::.||||   .:...||...:....:.:|.
 Frog   136 IPRTLHQIFEKL----SENGTEFSVKVSLLEIYNEELFDLLS---PSPDVGERLQMFDDPRNKRG 193

  Fly   315 ALKVREHPIFGPYVVDLSAHSVDS-YSALRNWLAVGNSQRATASTAMNDKSSRSHSIFNIVLNLT 378
            .:      |.|  :.::|.|:.|. |..|..    |.::|.||||.||..||||||:|::.:::.
 Frog   194 VI------IKG--LEEVSVHNKDEVYHILER----GAARRKTASTLMNAYSSRSHSVFSVTIHMK 246

  Fly   379 DLSSDDGLSSDTDSSTASSLRQTRRSKISLVDLAGSERISVSGSNGERIREGVSINKSLLTLGKV 443
            :             :|.......:..|::||||||||.|..||:..:|.||..:||:||||||:|
 Frog   247 E-------------TTVDGEELVKIGKLNLVDLAGSENIGRSGAVDKRAREAGNINQSLLTLGRV 298

  Fly   444 IAALADSRKAIANGPLGSGTPSTFVPYRESVLTWLLRENLGGNSKTVMLATISPASIHADETLAT 508
            |.||.:.              :..:|||||.||.:|:::|||.:||.::||:|||||:.:||::|
 Frog   299 ITALVER--------------APHIPYRESKLTRILQDSLGGRTKTSIIATVSPASINLEETVST 349

  Fly   509 LRYACKARSIVNRVKVNESPHDK-IIRDLRAEVDRLKS------------LRNE-YERQRRLSGN 559
            |.||.:|::|:|:.:||:....: :|::...|::|||.            |.|| ||   :|.|.
 Frog   350 LEYANRAKNIMNKPEVNQKLTKRALIKEYTEEIERLKRDLATAREKNGVYLSNENYE---QLQGK 411

  Fly   560 --SNNPVPRKIIIETSVDETEVEALRQQLAERERELSRAQKSWMEKLKEAEDQRKSELRVLKRRG 622
              |...:..:...:.:..|.|::.:.:..||.::||.........|.||.|:.:|:         
 Frog   412 VLSQEEIITEYTEKITAMEEEIKRINELFAENKKELEECTTILQCKEKELEETQKN--------- 467

  Fly   623 LALELTAEQ--KQACLVNL--TADPILSGTLFYLLPQGLVRIGRGRLPGGSSSSQPDI-----VL 678
              |..:.||  ::|.:|..  |.:..|.||...||.  .||           .:..|:     .|
 Frog   468 --LHESKEQLAQEAFVVTALETTEKKLHGTANKLLT--TVR-----------ETSKDVSGLHAKL 517

  Fly   679 DGPLVALQHCSIEHER-----GGKLYVIPGSEDFETYVNGELLKDRRQLFHGDRL--VIGGSH-- 734
            |......||.:..||.     ..:..||..|.| |..|..:.:.|    |:.:.:  ::|.|.  
 Frog   518 DRKRAVDQHNTQVHENFAEQMNKRFSVIERSVD-EYSVKQQGMLD----FYTNSIDDLLGASSAA 577

  Fly   735 ----YFRISNPFCSQR----GKADHPVDFQLAHQEILQKQ----------------EQQLRSELE 775
                ...::..|.|.:    .|..|.|| ::..||.|..|                ||.||::|.
 Frog   578 LSVTATAVAKSFTSVQETVSEKVSHSVD-EILKQETLSSQAKDDLQKLMAAHRTGLEQALRTDLL 641

  Fly   776 AEKRAALT-----------------KIEQER-------AQHAR-------DFEERLQCLELEQFK 809
            ....|.|.                 ||:..:       .:|:|       |....|..::.|...
 Frog   642 PVVTAVLNLNSHLSHCLQNFQAVADKIDSHKEEMNSFFTEHSRSLHRLRLDSGSALSSIQSEYES 706

  Fly   810 YKCNSE---------------MLETERQALALAQQQ----------------------------- 830
            .|...|               .|:.:...||:..||                             
 Frog   707 LKVEIETAQSMHSEGVNNLIGSLQNQLNLLAMETQQNFSGFLAKGGKLQKSVGCLQQDLDSISSD 771

  Fly   831 --EHTPLRHEDAVSTPAQKSTILEDIQRIM---LNPSEESLHKTQLMV-------KEATQRC--- 880
              |||...|:   ....|...|..:|:::.   :...|||..:.:.:.       :|:...|   
 Frog   772 AIEHTSSHHD---KFAGQSQDIAVEIRQLAASNMGTLEESSKQCEKLTGSINAISRESQHWCESA 833

  Fly   881 -RQLDLPLEFRQTQTPDEFGLLRTVILILDKQRGLKAEWPTARLGVWLDLV----RDNAEQQ-EK 939
             :|:|..||       ::...|||      .::.|::......:|....:|    ..||::| |:
 Frog   834 SQQIDSLLE-------EQVCYLRT------SKKHLQSLQKDVEVGCGASVVEITEHVNAQRQAEE 885

  Fly   940 LNATTIFQSVEVDWEPLD---ADLNETLSDTHNSSRIALNLSAMKDVLLNKPLKRLLNASSSKSN 1001
            ...|::.:.|..|.|.|.   .:|:|.:....|.....||.....||              ....
 Frog   886 KALTSLVEQVRDDKEMLGEQRLELHEQVQSGQNKVNSYLNEELRNDV--------------PTGT 936

  Fly  1002 TPRQTSTPSPGSQLVHFTKRLLTYDPEEIPESQSSFTTLVQQELQIMQRSAQRLRRHCEAAL--- 1063
            ||::.....| |.||. ||      |.::         |::|..|..|...:.:......|:   
 Frog   937 TPQRRDYVYP-SLLVR-TK------PRDV---------LLEQFRQQQQEYLESISSVISEAVEPP 984

  Fly  1064 LERENHQDNGVLAVSLQEALARMDTVLN 1091
            :|:::.:|...:||:        |:|::
 Frog   985 VEQDSLEDEPPVAVN--------DSVMS 1004

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nebNP_476817.1 KISc_KIF1A_KIF1B 119..525 CDD:276816 142/405 (35%)
SMC_N 514..>615 CDD:481474 29/116 (25%)
FHA_KIF14 627..741 CDD:438759 29/135 (21%)
kif11NP_001016116.2 KISc_BimC_Eg5 16..368 CDD:276815 144/407 (35%)
SMC_prok_B 376..>635 CDD:274008 64/291 (22%)
sbcc 406..>915 CDD:129705 109/557 (20%)
Microtub_bind 927..1066 CDD:464048 22/117 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1048..1067
Blue background indicates that the domain is not in the aligned region.

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