DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment neb and Klp54D

DIOPT Version :9

Sequence 1:NP_476817.1 Gene:neb / 35293 FlyBaseID:FBgn0004374 Length:1121 Species:Drosophila melanogaster
Sequence 2:NP_001303355.1 Gene:Klp54D / 47216 FlyBaseID:FBgn0263076 Length:760 Species:Drosophila melanogaster


Alignment Length:713 Identity:206/713 - (28%)
Similarity:327/713 - (45%) Gaps:175/713 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 SGSTPQPKPKPTAL-----NACYTPSSLYRNANSTPG-RAKTP--GTGKSSCS------------ 100
            :||..:..|..|:.     .:..:.||:.|:.:.|.| |..:|  |||.|..:            
  Fly    68 AGSRGRKTPSTTSTGQSQRQSSGSSSSMPRSRSLTNGMRRLSPQKGTGSSGGTGGGGGSSRNTPY 132

  Fly   101 --RTKER-----DSL---------MESCLSVSEESNMIVAVRVRPLNALECTRGQVTNVVQVHGN 149
              |::|.     |:|         .|.|  .:.|.|:.|.|||||||..| .|.:..:.:|..||
  Fly   133 FLRSRENEIGSADTLEIVASKSTGSEEC--STPEDNINVVVRVRPLNDKE-KRDRHGSTLQFPGN 194

  Fly   150 ------SNELTVQAGSSADASAGVTHFFSYDQVYYSCDPERKNFACQAKV--FEGTARPLIDTAF 206
                  .|::..:...:.|:    ...|:|:.|:   :|.    |.|..:  :.|..| :|:...
  Fly   195 GQVILEGNDVGQKRSHNRDS----VRVFTYNVVF---EPG----ATQEDILDYSGIKR-IIEMGI 247

  Fly   207 EGYNACLFAYGQTGSGKSYSMMGIEALDDAALDGGP-PHD-EAGIIPRFCHELFRRIEAVKSQQQ 269
            ||::...|.||||||||::::.|...|    ..|.| |.| ..|:|.|....||   :.:|:::.
  Fly   248 EGFSCTAFCYGQTGSGKTHTLTGPPDL----FVGKPNPKDPRHGLIFRSFLYLF---QLIKNRKD 305

  Fly   270 LQVEVEVSYFEIYNEKIHDLLSVQHAAAATGESTPIQQQQQQQRPALKVREHPIFGPYVVDLSAH 334
            :...::.|:.|||||::.|||:...|                 |..|.||.....|.:.|: :..
  Fly   306 VNYVLKASFMEIYNERVIDLLNPGSA-----------------RKPLAVRWSKKSGGFFVE-NLF 352

  Fly   335 SVDSYSALRNWLAV---GNSQRATASTAMNDKSSRSHSIFNIVLNLTDLSSDDGLSSDTDSSTAS 396
            :||. ..|.:.|||   |...||..|.||||.|||||:|..:.: |:|..:|.|:.         
  Fly   353 TVDC-EELDDLLAVLEEGMRNRAVGSHAMNDHSSRSHTILTVHI-LSDQQTDGGVF--------- 406

  Fly   397 SLRQTRRSKISLVDLAGSERISVSGSNGERIREGVSINKSLLTLGKVIAALADSRKAIANGPLGS 461
               .::..||:.|||||||....:.|.|:.:.|..:|||||:.||..|::|:||:|...:     
  Fly   407 ---LSKHGKINFVDLAGSELTKKTMSEGKTLEEANNINKSLMVLGYCISSLSDSKKRTGH----- 463

  Fly   462 GTPSTFVPYRESVLTWLLRENLGGNSKTVMLATISPASIHADETLATLRYACKARSIVNRVKVNE 526
                  :|||:|.||.||.::|.||..|:|:|.:|||..:..|||.|||||.:|:.|..:..:..
  Fly   464 ------IPYRDSQLTKLLADSLAGNGVTLMIACVSPAHYNHAETLNTLRYASRAKRIRTKPVIKM 522

  Fly   527 SPHDKII----RDLRA---EVDRLKSLRNEYERQR---------------RLSGNSNNPVPRKII 569
            .|.:.:|    ||:.|   |.|.||:..|.:.:..               |:|.....||| |:.
  Fly   523 DPREALILSLKRDIHALQMENDHLKAALNLHHQAAPNGGPVENLLELQLDRVSSGGGVPVP-KVD 586

  Fly   570 IE--TSVDETEVEALRQQLAERERELSRAQKSWMEKLKEA--EDQ----RKSELRVLKRRGLALE 626
            ::  ..:|.:|:..| .:|...|.|..|.:.:.:..::|.  .||    |::| |:||:    ||
  Fly   587 LQRLPELDGSELAEL-VKLYMVENESLRQENNHLFTVRETILRDQEIVCRENE-RLLKK----LE 645

  Fly   627 LTAEQKQACLVN--LTADPILS--------GTLFYLLPQGLVRIGRGRLPGGSSSSQPDIVLD 679
               :..:.|:.:  :.|.|.:|        ||..:..|:.|      :.|.|     ||:.::
  Fly   646 ---DVNKVCVRSPLIPARPAISPTTGKETPGTEIWTNPEPL------QSPPG-----PDLPIE 694

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nebNP_476817.1 KISc_KIF1A_KIF1B 119..525 CDD:276816 139/418 (33%)
KISc 120..525 CDD:214526 139/417 (33%)
Kinesin_assoc 524..657 CDD:292801 40/172 (23%)
FHA 634..740 CDD:238017 12/56 (21%)
Klp54DNP_001303355.1 KISc 166..520 CDD:214526 139/416 (33%)
KISc 166..512 CDD:276812 137/408 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45437887
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24115
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

Return to query results.
Submit another query.