Protein Alignment neb and Kif3C

DIOPT Version :10

• Sequence 1: NP_476817.1
• Gene: neb / 35293
• FlyBaseID: FBgn0004374
• Length: 1121
• Species: Drosophila melanogaster
• Sequence 2: NP_651939.4
• Gene: Kif3C / 43820
• FlyBaseID: FBgn0039925
• Length: 649
• Species: Drosophila melanogaster
• Alignment Length: 526
• Identity: 173/526 - (32%)
• Similarity: 265/526 - (50%)
• Gaps: 104/526 - (19%)

  Fly   120 NMIVAVRVRPLNALECTRGQVTNVVQVHGNSNELTVQAGSSADASAGVTH--FFSYDQVY-YSCD 181
            |:.|.||.||:|..|..| ...|:|::    ||..|   |..:.||.::.  .|.:|.|| ...|
  Fly     4 NIKVVVRCRPMNQTEKER-NCQNIVEI----NEFAV---SVTNPSARISQQKKFIFDSVYNMKTD 60

  Fly   182 PERKNFACQAKVFEGTARPLIDTAFEGYNACLFAYGQTGSGKSYSMMGIEALDDAALDGGPPHDE 246
            .|        .:::.....|:::..||||..:|||||||.||:::|.|.|...::
  Fly    61 TE--------VIYDEMCYSLVESTIEGYNGTIFAYGQTGCGKTHTMQGDENFSNS---------- 107

  Fly   247 AGIIPRFCHELFRRIEAVKSQQQLQVEVEVSYFEIYNEKIHDLLSVQHAAAATGESTPIQQQQQQ 311
            .||||:....:|.||....:.:.|.:   |:|.|||||:|.|||:       ..|:|.:...
  Fly   108 TGIIPKCFDHIFERISMTTNVRYLAL---VTYLEIYNERIRDLLN-------KNENTNVINH--- 159

  Fly   312 QRPALKVREHPIFGPYVVDLSAHSVDSYSALRNWLAVGNSQRATASTAMNDKSSRSHSIFNIVLN 376
                 .::|.|..|..|..|:...|.:.:...:||..||..|.||:|.||..|||||:||.|.|.
  Fly   160 -----FLKELPGIGVSVPTLTTQPVVNANQCYDWLHFGNKNRVTAATLMNKNSSRSHTIFTITLE 219

  Fly   377 ----LTDLSSD--DGLSSDTDSSTASSLRQTRRSKISLVDLAGSERISVSGSNGERIREGVSINK 435
                |..:.||  .|:.               |.|:||||||||||...:|:.|:|::|...||.
  Fly   220 QSPFLNSIGSDAFGGIC---------------RGKLSLVDLAGSERQRKTGAQGDRLKEASQINL 269

  Fly   436 SLLTLGKVIAALADSRKAIANGPLGSGTPSTFVPYRESVLTWLLRENLGGNSKTVMLATISPASI 500
            ||..||.||::|.|.:             :..||:|:|.||.||:::||||:||:|::.|||..|
  Fly   270 SLSALGNVISSLVDGK-------------AKHVPFRDSKLTRLLQDSLGGNTKTLMISCISPTDI 321

  Fly   501 HADETLATLRYACKARSIVNRVKVNESPHDKIIRDLRAEVDRLKSLRNEYERQRRLSGNSNNP-- 563
            |.|||::|||||.:|::|.|:.|:||.|.|..:|..:.|:..||.:..|   .:::...:|:|
  Fly   322 HYDETISTLRYASRAKNISNKPKINEDPKDARLRQYQNEILYLKRMLQE---SQQIINKNNDPNK 383

  Fly   564 ---VPRKIIIETSVDETEVEALRQQLAERERE-----------LSRAQKSWMEKLKEAEDQRKSE 614
               .|.|||..|:::.|:    ..|:.:..|.           |::.....::..:|.:.|.:|.
  Fly   384 IIKSPLKIIQHTNMNSTK----NVQIIDLGRNCKASFKTNNSILTKPNFPLIQSKEEVQLQARSR 444

  Fly   615 LRVLKR 620
            :.::||
  Fly   445 IDLIKR 450

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
neb	NP_476817.1	KISc_KIF1A_KIF1B	119..525	CDD:276816	148/413 (36%)
		SMC_N	514..>615	CDD:481474	27/116 (23%)
		FHA_KIF14	627..741	CDD:438759
Kif3C	NP_651939.4	Motor_domain	3..339	CDD:473979	145/406 (36%)