DRSC/TRiP Functional Genomics Resources

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Protein Alignment neb and Klp68D

DIOPT Version :9

Sequence 1:NP_476817.1 Gene:neb / 35293 FlyBaseID:FBgn0004374 Length:1121 Species:Drosophila melanogaster
Sequence 2:NP_001261726.1 Gene:Klp68D / 39332 FlyBaseID:FBgn0004381 Length:784 Species:Drosophila melanogaster


Alignment Length:966 Identity:241/966 - (24%)
Similarity:404/966 - (41%) Gaps:293/966 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 RAKTPGTGKSSCSRTKERDSLMESCLSVSEESNMIVAVRVRPLNALECTRGQVTNVVQVHGNSNE 152
            :::.||||.|...         ..|:.        |.||.||::..|.:. :...||.|:.|...
  Fly     4 KSRRPGTGSSQTP---------NECVQ--------VVVRCRPMSNRERSE-RSPEVVNVYPNRGV 50

  Fly   153 LTVQAGSSADASAGVTHFFSYDQVYYSCDPERKNFACQAKVFEGTARPLIDTAFEGYNACLFAYG 217
            :.:|  :..|.:......|:||..|.:.       |.|..::.....||:.:..||:|.|:||||
  Fly    51 VELQ--NVVDGNKEQRKVFTYDAAYDAS-------ATQTTLYHEVVFPLVSSVLEGFNGCIFAYG 106

  Fly   218 QTGSGKSYSMMGIEALDDAALDGGPPHDEAGIIPRFCHELFRRIEAVKSQQQLQVEVEVSYFEIY 282
            |||:||:::|.|:...|:.          .|||||...:::..|...::.|.|   |:|||.|||
  Fly   107 QTGTGKTFTMEGVRGNDEL----------MGIIPRTFEQIWLHINRTENFQFL---VDVSYLEIY 158

  Fly   283 NEKIHDLL--SVQHAAAATGESTPIQQQQQQQRPALKVREHPIFGPYVVDLSAHSVDSYSALRNW 345
            .|::.|||  :.:|                     |:|||.. .|.||.:|.|.:..|...:...
  Fly   159 MEELRDLLKPNSKH---------------------LEVRERG-SGVYVPNLHAINCKSVEDMIKV 201

  Fly   346 LAVGNSQRATASTAMNDKSSRSHSIFNIVLNLTDLSSDDGLSSDTDSSTASSLRQTRRSKISLVD 410
            :.|||..|....|.||:.|||||:||.|.:.:          .||:::|      .:..|::|:|
  Fly   202 MQVGNKNRTVGFTNMNEHSSRSHAIFMIKIEM----------CDTETNT------IKVGKLNLID 250

  Fly   411 LAGSERISVSGSNGERIREGVSINKSLLTLGKVIAALADSRKAIANGPLGSGTPSTFVPYRESVL 475
            ||||||.|.:|::.||::|...||.:|.:||.||:|||:|              |..||||:|.|
  Fly   251 LAGSERQSKTGASAERLKEASKINLALSSLGNVISALAES--------------SPHVPYRDSKL 301

  Fly   476 TWLLRENLGGNSKTVMLATISPASIHADETLATLRYACKARSIVNRVKVNESPHDKIIRDLRAEV 540
            |.||:::|||||||:|:|.|.|::.:.:|||.|||||.:|:||.|:...||.|.|..:::.:.|:
  Fly   302 TRLLQDSLGGNSKTIMIANIGPSNYNYNETLTTLRYASRAKSIQNQPIKNEDPQDAKLKEYQEEI 366

  Fly   541 DRLKSLRNEYERQRRLSGNSNNPVPRKIIIETSVDETEVEALRQQLAERERELSRAQKSWMEKLK 605
            :|||.|....::||                    .|.:|.|.:|::.:.::|  ...|...:.|:
  Fly   367 ERLKRLIGPQQQQR--------------------SEKQVTAKKQRVKKPKKE--TVTKEMSDSLQ 409

  Fly   606 -----------------EAEDQRKSELRVLKRRGLALELTAEQKQACLVNLTADPILSGTLFYLL 653
                             |:|..:::|..|.|...   ||..|                       
  Fly   410 VSTIEQPVEDDSDPEGAESESDKENEAEVAKSNE---ELERE----------------------- 448

  Fly   654 PQGLVRIGRGRLPGGSSSSQPDIVLDGPLVALQHCSIEHERGGKLYVIPGSEDFETYVNGELLKD 718
                 |:...:|....:.      |:|.||          ||||..:       :||       .
  Fly   449 -----RVENSKLAAKLAE------LEGQLV----------RGGKNLL-------DTY-------S 478

  Fly   719 RRQLFHGDRLVIGGSHYFRISNPFCSQRGKADHPVDFQLAHQE--ILQKQEQQLRSELEAE-KRA 780
            .||:....:||            ..::|.|.:..:..||..||  .|:.:|:.:..|.|.| |:.
  Fly   479 ERQIELEKKLV------------EIAERKKREIEIQQQLELQEETTLEIRERNVSLEQEVELKKR 531

  Fly   781 ALTK-------IEQE----RAQHARDFEERLQCLELEQFKYKCNSEMLETERQALAL-------A 827
            .|:|       ::||    ::.|.:|..|    ||:.|     |..:.|.:||.|.:       .
  Fly   532 KLSKCYAKYLALQQELNDCKSDHNQDLRE----LEMAQ-----NELVKELKRQLLIIDNFVPIEV 587

  Fly   828 QQQEHTPLRHED--------AVSTPAQKSTILEDIQRIMLNPSEESLHKTQLMVKEATQRCRQLD 884
            :|:.:|..::::        ::|.|..              |..:....::..|....:|....:
  Fly   588 KQRLYTQAKYDEEQEEWKFSSMSLPTP--------------PGGDGKFSSKRPVSHPQRRRPTSE 638

  Fly   885 LPLEFRQTQTPDEFGLLRTVILILDKQRGLKA--EWPTARLGVWLDLVRDNAEQQEKLNATTIFQ 947
            ..|:..::.:|.........|:..:.:...:.  |:.|.::...|..|              :.|
  Fly   639 YALQEAKSNSPSSLRFKSENIVNYELEMPCRTTQEYRTPKVSASLQAV--------------LAQ 689

  Fly   948 SVEVDWEPLDADLNETLSDTHNSSRIALNLSAMKDVLLNKPLKRLLNASSSKSNTP 1003
            :::...:.:|      :.|:|.:|             |...|:.::||:::....|
  Fly   690 AMQTGGDDID------IVDSHTNS-------------LRSRLENIINANANGGAGP 726

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nebNP_476817.1 KISc_KIF1A_KIF1B 119..525 CDD:276816 142/407 (35%)
KISc 120..525 CDD:214526 142/406 (35%)
Kinesin_assoc 524..657 CDD:292801 26/149 (17%)
FHA 634..740 CDD:238017 16/105 (15%)
Klp68DNP_001261726.1 Motor_domain 18..344 CDD:277568 140/408 (34%)
KISc 20..351 CDD:214526 142/413 (34%)
GBP_C <479..576 CDD:303769 29/117 (25%)
coiled coil 547..558 CDD:293879 1/10 (10%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45437998
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24115
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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