DRSC/TRiP Functional Genomics Resources

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Protein Alignment neb and Klp59D

DIOPT Version :10

Sequence 1:NP_476817.1 Gene:neb / 35293 FlyBaseID:FBgn0004374 Length:1121 Species:Drosophila melanogaster
Sequence 2:NP_611762.1 Gene:Klp59D / 37674 FlyBaseID:FBgn0034827 Length:729 Species:Drosophila melanogaster


Alignment Length:783 Identity:192/783 - (24%)
Similarity:291/783 - (37%) Gaps:265/783 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 AEDREHRDRPEQLLNTAFSGSTPQPKPK--------------------------PTALNA----- 71
            ||::....:|...|.....||:|...||                          |.|:.|     
  Fly    63 AENQPPISKPPSSLLPKPRGSSPTGGPKTHTGNPYAERMRVQDGRSKIATRKTDPAAVGAGNHEL 127

  Fly    72 --CYTP----SSLYRNANSTPGRAKTPGTGKSS------------------------CSRTKERD 106
              .:||    ....|:|:.|.|| |:.|...|:                        ..:.:|:|
  Fly   128 GRAHTPRVPAGRPDRDASPTQGR-KSQGGNNSNQRFSSVVREVNRMKEQREKRRARQAEQLQEKD 191

  Fly   107 SLMESCLSVSEESNMIVAVRVR---------PLNALECTRGQVTNVV---------QVHGNSNEL 153
            :|..   :.....|..|:|.:|         ||..|:...|.|..:.         :...||..|
  Fly   192 ALRR---NNPGNPNWEVSVMLRQYRSTLIFSPLRCLDPNGGTVQQITVCVRKRPMSRKEENSKNL 253

  Fly   154 TVQAGSSADA--------SAGVT-----HFFSYDQVYYSCDPERKNFACQAKVFEGTARPLIDTA 205
            .:....|||:        ...:|     |.|.:|   |:.|.|..|    |.|::.||||||.|.
  Fly   254 DIITVPSADSLIVHELRLKVDLTKFLEHHKFRFD---YTFDEECSN----ALVYDHTARPLIRTM 311

  Fly   206 FEGYNACLFAYGQTGSGKSYSMMG--IEALDDAALDGGPPHDEAGIIPRFCHELFRRIEAVKSQQ 268
            |||.||..||||||||||:::|.|  ...:.|..         .||......::|..:.. ...:
  Fly   312 FEGGNATCFAYGQTGSGKTHTMGGEFFGKVQDCG---------TGIYAMAARDVFEEVSR-PEYR 366

  Fly   269 QLQVEVEVSYFEIYNEKIHDLLSVQHAAAATGESTPIQQQQQQQRPALKVREHPIFGPYVVDLSA 333
            |:..::..|:||||..|:.|||                   ...:|.|:|.|.......||.|:.
  Fly   367 QMGAKITCSFFEIYGTKVFDLL-------------------LPNKPMLRVLEDARQQVVVVGLTE 412

  Fly   334 HSVDSYSALRNWLAVGNSQRATASTAMNDKSSRSHSIFNIVLNLTDLSSDDGLSSDTDSSTASSL 398
            ..|.....:...:..|:.:|.:..|:.|.||||||::|.|.|:..|.....|             
  Fly   413 MPVTKVEDVLRLIEHGSKERTSGQTSANAKSSRSHAVFQIALHFPDSWGPHG------------- 464

  Fly   399 RQTRRSKISLVDLAGSERISVSGSNGERIR-EGVSINKSLLTLGKVIAALADSRKAIANGPLGSG 462
                  |.|.|||||:||.:.:.|...:.| ||..||||||.|.:.|.||  ||:          
  Fly   465 ------KCSFVDLAGNERGADTQSADRQTRIEGAEINKSLLALKECIRAL--SRQ---------- 511

  Fly   463 TPSTFVPYRESVLTWLLRENL--GGNSKTVMLATISPASIHADETLATLRYACKARSIVNRVKVN 525
              |:.:|:|.|.||.:||::.  |..:||.|:|.|||:....:.||.|||||.:.:.::.:    
  Fly   512 --SSHLPFRGSKLTQVLRDSFVGGKKNKTCMIAMISPSMSCVENTLNTLRYADRVKELIAK---- 570

  Fly   526 ESPHDKIIRDLRAEVDRLKSLRNEYERQRRLSGNSNNPVPRKIIIETSVDETEVEALRQQLAERE 590
                         |.:.|:|:..:.|:...|:                 :|:|.|    .:|:.|
  Fly   571 -------------EDEHLQSVEGDGEKSPDLN-----------------EESEPE----MMADEE 601

  Fly   591 RELSRAQKSWMEKLKEAEDQRKSELRVLKRRGLALELTAEQKQACLVNLTADPILSGTLFYLLPQ 655
            .:            :|.||:....|.:           :.::.:...|::.|...:.||..|.|.
  Fly   602 GD------------EEPEDEDNQHLTI-----------SSEEASSYNNMSYDMSFNHTLNILGPS 643

  Fly   656 GLVRIGRGRLPGGSSSSQPDIVLDGPLVALQHCSIEHERGGKLYVIPGSEDFETYV-NGELLKDR 719
            ..|.|..                    ||.||..:             .|:.|||. |...||..
  Fly   644 RNVDIQE--------------------VAEQHALL-------------VENLETYAHNFRQLKTD 675

  Fly   720 RQL 722
            :::
  Fly   676 KEI 678

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nebNP_476817.1 KISc_KIF1A_KIF1B 119..525 CDD:276816 134/441 (30%)
SMC_N 514..>615 CDD:481474 13/100 (13%)
FHA_KIF14 627..741 CDD:438759 19/97 (20%)
Klp59DNP_611762.1 KISc_KIF2_like 233..565 CDD:276818 125/400 (31%)

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