DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment neb and Klp59C

DIOPT Version :9

Sequence 1:NP_476817.1 Gene:neb / 35293 FlyBaseID:FBgn0004374 Length:1121 Species:Drosophila melanogaster
Sequence 2:NP_611759.1 Gene:Klp59C / 37671 FlyBaseID:FBgn0034824 Length:626 Species:Drosophila melanogaster


Alignment Length:577 Identity:163/577 - (28%)
Similarity:248/577 - (42%) Gaps:136/577 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 GRAKTPGTGKSSCSR--TKERDSLMESCLSVSEESN-------MIVAVRVRPLNALE-CTRGQVT 141
            |:.:.||......:|  ..:|:. |||....|..:|       ::|.||.|||...| ..|.|  
  Fly   146 GKNEDPGNPNWEVARMIRLQREQ-MESQRVRSGTTNERINCHQIMVCVRKRPLRRKELADREQ-- 207

  Fly   142 NVVQVHGNSNELTVQAGSSADASAGV-THFFSYDQVYYSCDPERKNFACQAKVFEGTARPLIDTA 205
            :||.:......:..:.....:....: .|.|.:|.|:   |.|..|    |.|:|.||||||...
  Fly   208 DVVSIPSKHTLVVHEPRKHVNLVKFLENHSFRFDYVF---DEECSN----ATVYEFTARPLIKHI 265

  Fly   206 FEGYNACLFAYGQTGSGKSYSMMG-IEALDDAALDGGPPHDEAGIIPRFCHELFRRIEAVKSQQQ 269
            |:|..|..||||||||||:|:|.| ......:::|        ||......::|..::.| ...:
  Fly   266 FDGGMATCFAYGQTGSGKTYTMGGQFPGRHQSSMD--------GIYAMAAKDVFSTLKTV-PYNK 321

  Fly   270 LQVEVEVSYFEIYNEKIHDLLSVQHAAAATGESTPIQQQQQQQRPALKVREHPIFGPYVVDLSAH 334
            |.::|..|:||||..::.|||                   ...:|.|:|.|.......||.|:.:
  Fly   322 LNLKVYCSFFEIYGTRVFDLL-------------------MPGKPQLRVLEDRNQQVQVVGLTQN 367

  Fly   335 SVDSYSALRNWLAVGNSQRATASTAMNDKSSRSHSIFNIVLNLTDLSSDDGLSSDTDSSTASSLR 399
            .|.:.:.:.:.|.:|||.|.:..|:.|.||||||::|.|||.                   |:..
  Fly   368 PVQNTAEVLDLLELGNSVRTSGHTSANSKSSRSHAVFQIVLR-------------------SAAG 413

  Fly   400 QTRRSKISLVDLAGSERISVSGSNGERIR-EGVSINKSLLTLGKVIAALADSRKAIANGPLGSGT 463
            :....|.||:||||:||.:.:.|...:.| ||..||||||.|.:.|.||              |.
  Fly   414 EKLHGKFSLIDLAGNERGADNSSADRQTRLEGSEINKSLLVLKECIRAL--------------GR 464

  Fly   464 PSTFVPYRESVLTWLLREN-LGGNS-KTVMLATISPASIHADETLATLRYACKARSIVNRVKVNE 526
            .|:.:|:|.|.||.:||:: :||.. ||.|:|.|||.....:.||.|||||              
  Fly   465 QSSHLPFRGSKLTQVLRDSFIGGKKVKTCMIAMISPCLHSVEHTLNTLRYA-------------- 515

  Fly   527 SPHDKIIRDLRAEVDRLKSLRNEYERQRRL-SGNSNNPVPRKIIIETS-------VDETEVEA-- 581
                          ||:|.|..|....:|: ..|..:.....|:.::|       ...|.:..  
  Fly   516 --------------DRVKELSVESIPSKRMPDANLGSTSMSDIVCQSSTQRLFPCASSTSMPGGG 566

  Fly   582 -LRQQLAERERELSRAQKSWMEKLKEAEDQRKSELRVLKRRGLALELTAEQKQACLV 637
             ..||......:|:|:||...:.......|     ::::|:|      :.|::|.::
  Fly   567 NQAQQHTNTANDLNRSQKPTSKPTYPTSGQ-----QLVQRKG------SSQREASMM 612

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nebNP_476817.1 KISc_KIF1A_KIF1B 119..525 CDD:276816 133/418 (32%)
KISc 120..525 CDD:214526 133/417 (32%)
Kinesin_assoc 524..657 CDD:292801 21/125 (17%)
FHA 634..740 CDD:238017 1/4 (25%)
Klp59CNP_611759.1 KISc_KIF2_like 187..519 CDD:276818 134/429 (31%)
Kinesin 193..520 CDD:278646 132/424 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45437825
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24115
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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