DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment neb and klp8

DIOPT Version :9

Sequence 1:NP_476817.1 Gene:neb / 35293 FlyBaseID:FBgn0004374 Length:1121 Species:Drosophila melanogaster
Sequence 2:NP_594675.1 Gene:klp8 / 2542849 PomBaseID:SPAC144.14 Length:511 Species:Schizosaccharomyces pombe


Alignment Length:609 Identity:157/609 - (25%)
Similarity:267/609 - (43%) Gaps:140/609 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 SNMIVAVRVRPLNALECTRGQVTNVVQVHGNSNELTVQAGSSADASAGVTH-----------FFS 172
            :|:.|.|||||.:..|.:: ...:::.|..::..:|:     .....|:.|           .|:
pombe     4 ANVRVIVRVRPKSLRELSK-SAEDLLSVDSHNKTVTI-----TPPKHGLKHSRHKNRVNGPRTFA 62

  Fly   173 YDQVYYSCDPERKNFACQAKVFEGTARPLIDTAFEGYNACLFAYGQTGSGKSYSMMGIEALDDAA 237
            :|:.:....||.||.:.|..|:|.|...|:.:..||:|:|...|||.|:||:||::|:.      
pombe    63 FDECFAPSAPESKNLSGQEDVYESTGPLLVKSILEGFNSCFITYGQKGTGKTYSVVGLR------ 121

  Fly   238 LDGGPPHDEAGIIPRFCHELFRRIEAVKSQQ-QLQVEVEVSYFEIYNEKIHDLLSVQ-HAAAATG 300
               |.|    ||||.....:|..|:.:|.:. ...:.|.:|..||..|..:|||... :::...|
pombe   122 ---GQP----GIIPHISESIFEEIDKLKKKSPNTTITVSISLAEIIEETPYDLLQPNVNSSHTPG 179

  Fly   301 ESTPIQQQQQQQRPALKVREHPIFGPYVVDL------SAHSVDSYSALRNWLAVGNSQRATASTA 359
            |:..:|:..             :.|.::..|      ||..:|::  ||  ||..|.:     |.
pombe   180 ETVFVQKDS-------------LTGYHLHGLSEFEVGSAQEIDAF--LR--LAAKNIR-----TE 222

  Fly   360 MNDKSS--RSHSIFNIVLNLTDLSSDDGLSSDTDSSTASSLRQTRRSKISLVDLAGSERISVSGS 422
            ::|.|.  :.||:|::|:....:          |..|..||:  :.|::.::|||       |.|
pombe   223 LSDISGVRKGHSVFSLVVQQRII----------DPKTRHSLK--KASRLQIIDLA-------SFS 268

  Fly   423 NGERIREGVSI------NKSLLTLGKVIAALADSRKAIANGPLGSGTPSTFVPYRESVLTWLLRE 481
            .|.:..|.:|.      ||||..|.:|||||...:..:            .:||::||||.||::
pombe   269 KGSQRNESISSFESSSNNKSLSVLNRVIAALTSKKNDV------------LIPYKDSVLTTLLQD 321

  Fly   482 NLGGNSKTVMLATISPASIHADETLATLRYACKARSIVNRVKV---------NESPHDKIIRDLR 537
            .||||.:|:||..:||...  |:|.:.|||:..||.|.|...:         ||...|.|:..|.
pombe   322 ALGGNCRTIMLTCVSPCDF--DDTFSALRYSEAARRIKNISNINCKEAYSTNNEGELDDILTTLE 384

  Fly   538 AEVDRLKSLRNEYERQRRLSGNSNNPVPRKIIIETSVD-ETEVEALRQQLAERERELSRAQKSWM 601
            ::.::|:  |:|...|:.|          |.|.|...| |..:.||..|.:..:..|..|..:::
pombe   385 SDREQLR--RHEEHSQKLL----------KFIEEIRNDYEERIHALESQNSALKAHLRLAVDAYL 437

  Fly   602 EKLKEAEDQRKSELRVLKRRGLALELTAEQKQACLVNLTADPILSGTLFYLLPQGLVRIGRGRLP 666
            ..|:...|.:..:|:......:|.:......|..|.:|..|               :::.:.:|.
pombe   438 NPLEFNFDDKNVKLKEFGSPNIAYKQELNSFQGELSSLFKD---------------LKLVKSQLH 487

  Fly   667 GGSSSSQPDIVLDGPLVALQHCSI 690
            ........||.:|  :.:|:|.|:
pombe   488 DYPKPEVSDIDMD--MESLRHDSL 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nebNP_476817.1 KISc_KIF1A_KIF1B 119..525 CDD:276816 122/441 (28%)
KISc 120..525 CDD:214526 122/440 (28%)
Kinesin_assoc 524..657 CDD:292801 28/142 (20%)
FHA 634..740 CDD:238017 10/57 (18%)
klp8NP_594675.1 KISc 5..354 CDD:276812 118/422 (28%)
Kinesin 11..356 CDD:278646 117/418 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR24115
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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