DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment neb and klp-13

DIOPT Version :9

Sequence 1:NP_476817.1 Gene:neb / 35293 FlyBaseID:FBgn0004374 Length:1121 Species:Drosophila melanogaster
Sequence 2:NP_001360738.1 Gene:klp-13 / 180865 WormBaseID:WBGene00002224 Length:678 Species:Caenorhabditis elegans


Alignment Length:560 Identity:151/560 - (26%)
Similarity:237/560 - (42%) Gaps:164/560 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 EESNMIVAVRVRPLN-------ALECT----------------RGQVTNVVQVHGNSNELTVQAG 158
            ::..:.|.|||||||       |.:|.                ...:....:.|....|.     
 Worm     4 QKQQLTVVVRVRPLNSGEKSRKAFQCVFPLDKKRVLLVDPEKFENNILRQNRQHERKFEF----- 63

  Fly   159 SSADASAGVTHFFSYDQVYYSCDPERKNFACQAKVFEGTARPLIDTAFEGYNACLFAYGQTGSGK 223
               |||.|.|                   :.|..|.|.|..|:||:..||:||.:||||.|||||
 Worm    64 ---DASFGAT-------------------SNQEDVHETTTGPIIDSVVEGFNATVFAYGATGSGK 106

  Fly   224 SYSMMGIEALDDAALDGGPPHDEAGIIPRFCHELFRRIEAVKSQQQLQVEVEVSYFEIYNEKIHD 288
            :::|:|.:             |..|::......|:.:::.       |.:|.:||.|||||.|.|
 Worm   107 TFTMIGTK-------------DRPGLMTLMTKTLYEKLDN-------QYQVLLSYMEIYNEIIRD 151

  Fly   289 LLSVQHAAAATGESTPIQQQQQQQRPALKVREHPIFGPYVVDLSAHSVDSYSALRNWLAVGNSQR 353
            ||:     .:.|:...::.::...|              |..||:....:.:.:...|..||.:|
 Worm   152 LLN-----PSGGDLELLEDERGNIR--------------VPGLSSVKAPNLTRIMQILQEGNLRR 197

  Fly   354 ATASTAMNDKSSRSHSIFNIVLNLTDLSSDDGLSSDTDSSTASSLRQTRRSKISLVDLAGSERIS 418
            ...:|..|..|||||::..:::                     ...|:..||:.::|||||||.|
 Worm   198 TQEATMANKTSSRSHALLQVMI---------------------VKNQSLHSKLFMIDLAGSERAS 241

  Fly   419 VSGSNGERIREGVSINKSLLTLGKVIAALADSRKAIANGPLGSGTPSTFVPYRESVLTWLLRENL 483
            .:.:.|.|::||.:||:|||.||.||.:||..             .:.||.||:|.||.||:::|
 Worm   242 NTQNRGIRLKEGAAINRSLLALGNVINSLASK-------------TTKFVNYRDSKLTRLLKDSL 293

  Fly   484 GGNSKTVMLATISPASIHADETLATLRYACKARSIVNRVKVNE-SPHDKIIRD------------ 535
            ||.:||.|:|.::|:|.:.:||..||.||.:|.:|.|:...|. :..|::..:            
 Worm   294 GGTAKTCMIAHVTPSSSNFEETYNTLMYASRAMNITNKPMRNRPASADQVYAEAMNAIRKEVGSQ 358

  Fly   536 -----------LRAEVDRLKSLRNEYERQRRLSGNSN-----NPVPRKIIIETSVDETEVEALRQ 584
                       .|:.|....|.||   |.:.:|.||:     .|:|        :|.....:|..
 Worm   359 IKNSSSITGLAARSSVQERSSSRN---RPKSISRNSSLTRAAQPMP--------IDRGRGGSLFT 412

  Fly   585 QLAERERELSRAQKSWMEKLKEAEDQRKS-ELRVLKRRGL 623
            ||.|:...||..||...|||.....:..| |:.::.:..:
 Worm   413 QLKEQYMTLSDKQKRLREKLMATNQEAYSLEMSLISKNAI 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nebNP_476817.1 KISc_KIF1A_KIF1B 119..525 CDD:276816 124/428 (29%)
KISc 120..525 CDD:214526 124/427 (29%)
Kinesin_assoc 524..657 CDD:292801 27/130 (21%)
FHA 634..740 CDD:238017
klp-13NP_001360738.1 Motor_domain 7..328 CDD:354959 122/420 (29%)
iSH2_PI3K_IA_R 413..>513 CDD:355389 12/40 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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