DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment neb and klp-4

DIOPT Version :9

Sequence 1:NP_476817.1 Gene:neb / 35293 FlyBaseID:FBgn0004374 Length:1121 Species:Drosophila melanogaster
Sequence 2:NP_001359864.1 Gene:klp-4 / 180608 WormBaseID:WBGene00002217 Length:1576 Species:Caenorhabditis elegans


Alignment Length:1130 Identity:319/1130 - (28%)
Similarity:501/1130 - (44%) Gaps:277/1130 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 EESNMIVAVRVRPLNALECTRGQVTNVVQVHGNSNEL--TVQAGSSADASAGVTHFFSYDQVYYS 179
            |||.:.||:||||.|..|... :..:||::......|  .::..:|..        |::|..:.|
 Worm     6 EESAVKVAIRVRPFNKRELDL-KTKSVVRIQKEQCVLHHPIEEKNSKT--------FTFDHSFCS 61

  Fly   180 CDPERKNFACQAKVFEGTARPLIDTAFEGYNACLFAYGQTGSGKSYSMMGIEALDDAALDGGPPH 244
            .||...:||.|..|.......:::.||.|||||:||||||||||||:|||..             
 Worm    62 TDPHSYDFASQETVSYHLGSGVVENAFSGYNACIFAYGQTGSGKSYTMMGTP------------- 113

  Fly   245 DEAGIIPRFCHELFRRIEAVKSQQQLQVEVEVSYFEIYNEKIHDLLSVQHAAAATGESTPIQQQQ 309
            |:.|||||.|:::|.||:.. |...|..:|||||.|||||::.|||                 ..
 Worm   114 DQPGIIPRVCNDIFTRIQET-SNSSLSFKVEVSYMEIYNERVRDLL-----------------DP 160

  Fly   310 QQQRPALKVREHPIFGPYVVDLSAHSVDSYSALRNWLAVGNSQRATASTAMNDKSSRSHSIFNIV 374
            ::...|||||||.|.||.|..||..:|:|:..:.|.|..||..|..|:|.||.:|||||::|:::
 Worm   161 KKSSKALKVREHKILGPMVDGLSILAVNSFEQISNLLEEGNKSRTVAATNMNAESSRSHAVFSLI 225

  Fly   375 LNLTDLSSDDGLSSDTDSSTASSLRQTRRSKISLVDLAGSERISVSGSNGERIREGVSINKSLLT 439
            :..|....::|.|.:            :.:||||||||||||...:|:.|:|:.||.:|||||.|
 Worm   226 VTQTLHDLENGFSGE------------KVAKISLVDLAGSERAGKTGAVGKRLEEGGNINKSLTT 278

  Fly   440 LGKVIAALAD--SRKAIANGPLGSGTPSTFVPYRESVLTWLLRENLGGNSKTVMLATISPASIHA 502
            ||.||:|||:  |:|            ..|:|||:|||||||:::|||||:|||:||:|||:.:.
 Worm   279 LGMVISALAERNSKK------------DKFIPYRDSVLTWLLKDSLGGNSRTVMIATLSPAADNY 331

  Fly   503 DETLATLRYACKARSIVNRVKVNESPHDKIIRDLRAEVDRLKSLRNEYERQRRLSGNSNNPVPRK 567
            :|||:|||||.:|:.|||...:||.|:.::||:||.||:.|                      |.
 Worm   332 EETLSTLRYADRAKKIVNHAIINEDPNARVIRELREEVETL----------------------RM 374

  Fly   568 IIIETSVDETEVEALRQQLAERERELSRAQKSWMEKLKEAEDQRKSELRVLKRRGLALE---LTA 629
            .|.:|..:..|.|.||::|||.||.:::..|||.|:|||.:...|...:.|...|:::|   :..
 Worm   375 QITQTKKEHAETEELRERLAESERLVAQMNKSWEERLKETDTLNKERQKDLTEIGISIESSGIKV 439

  Fly   630 EQKQACLVNLTADPILSGTLFYLLPQGLVRIGR----------GRLPGGSSSSQPD-------IV 677
            |:.:..|||:.|||.|:..|.|.: .|...||.          |.....|.||:.|       ||
 Worm   440 EKDRFYLVNMNADPSLNELLVYYI-NGSAIIGNSEELETSRDSGLSMTCSDSSRRDDDKERTSIV 503

  Fly   678 LDGPLVALQHCSIE-HERGG--KLYVIPGSEDFETYVNGELLKDRRQLFHGDRLVIGGSHYFRIS 739
            |.|..:..:|..:. .|.||  :|:|.|.|.:....|||:.:.:|..|.:|:||::|.:|:|:::
 Worm   504 LRGLGIMRRHAKMTVEEYGGRLRLFVAPMSSECRICVNGKQITERTLLRNGNRLLVGMNHFFKVN 568

  Fly   740 NP---FCSQRGKADHPV-DFQLAHQEI---------LQKQEQQLRSELEAEKRAALTKIEQERAQ 791
            .|   ...|....|..: |:..|..|:         :.:..:.:..:.:.:|:|||       .|
 Worm   569 CPKVMDMEQSIMEDSTMFDYNDAWHEVNDANPISSAVDQYMESVTLKHQEDKKAAL-------EQ 626

  Fly   792 HARDFEERLQ-----------------CLE--------LEQFKYKCNSEMLETERQALALAQQQE 831
            ....||:.:|                 ||.        |..|.:..|.:. ..:.:....||::|
 Worm   627 QYEAFEKYIQSLTAGGFTPSTPMTPGFCLPTPITTPTGLPPFPFPANPKQ-SVKSKFFYWAQRKE 690

  Fly   832 H----------TPLRHEDAVSTPAQKSTILEDIQRIMLNPSEESLHKTQLMVKEATQRCRQLDLP 886
            .          ..:.|.:|:...|  :.|.:::.:   .|..::.:...|.:..:..|      |
 Worm   691 EMFAESLKRLKADVIHANALVREA--NMISKELNK---KPKRQTTYDVTLQIPASNLR------P 744

  Fly   887 LEFRQTQTPDEFGLLRTVILILDKQRGLKAE--WPTARL--------GVWLDLVRDNAEQQEKLN 941
            ::.:..|.     :...||::  ::.|:...  |..::|        ..:.|::.......|.||
 Worm   745 IKIKAGQF-----VCEPVIVV--RREGMSGSQFWTVSQLESRLVDMRDTYNDMLNGFTRTSESLN 802

  Fly   942 AT------------------------------------------TIFQSVEVDWE-PLDADLNET 963
            .|                                          .:|..:.:|:: |:.:...|.
 Worm   803 GTPHASPMKIAGIPMNECSSLVIDPFFESQEHHNLVGVANVFLEVLFHDLRLDYQVPIISQQGEV 867

  Fly   964 LSDTHNSSRIALNLSAMKDVLLNKPLKRLLNASSSKSNTPRQTSTPSPGSQLV-------HFTKR 1021
            ....|......:....|.:...|.|...|....:.:....|.:..|...|..|       :.::.
 Worm   868 AGRLHVQIFRVVTQEEMDETSNNGPETLLGKTITCRVRIKRASGLPEKLSNFVFCQYSFFNISEL 932

  Fly  1022 LLTYDPEE-----------IPESQSSFTTLVQQELQIMQRS--------AQRLRRHCEAALLERE 1067
            |:.....|           |.|.|..|..:|.:|.....|.        ..|:..|.|..:|:.:
 Worm   933 LVVAPANEAANHSSCPTTVIFEHQRDFNVMVTEEFMEYVRDDALSIEVWGHRICGHPEERILDTD 997

  Fly  1068 NHQDNGVLAVSLQ----EALARMDT 1088
            ..      :.|||    |...|::|
 Worm   998 EK------SKSLQNRWMEVTRRLET 1016

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nebNP_476817.1 KISc_KIF1A_KIF1B 119..525 CDD:276816 170/409 (42%)
KISc 120..525 CDD:214526 169/408 (41%)
Kinesin_assoc 524..657 CDD:292801 43/135 (32%)
FHA 634..740 CDD:238017 40/125 (32%)
klp-4NP_001359864.1 KISc_KIF1A_KIF1B 10..354 CDD:276816 169/407 (42%)
Kinesin_assoc 351..463 CDD:374417 43/133 (32%)
FHA 496..545 CDD:214578 15/48 (31%)
KIF1B 776..840 CDD:372100 6/63 (10%)
DUF3694 <1239..1293 CDD:372133
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D76316at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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