DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment neb and Kif3b

DIOPT Version :9

Sequence 1:NP_476817.1 Gene:neb / 35293 FlyBaseID:FBgn0004374 Length:1121 Species:Drosophila melanogaster
Sequence 2:NP_032470.3 Gene:Kif3b / 16569 MGIID:107688 Length:747 Species:Mus musculus


Alignment Length:962 Identity:254/962 - (26%)
Similarity:407/962 - (42%) Gaps:268/962 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 SEESNMIVAVRVRPLNALECTRGQVTNVVQVHGNSNELTVQ--AGSSADASAGVTHFFSYDQVYY 178
            |.||..:| ||.||:|..| .......||.|.....:::|:  .|:|.:    :...|::|.|| 
Mouse     6 SSESVRVV-VRCRPMNGKE-KAASYDKVVDVDVKLGQVSVKNPKGTSHE----MPKTFTFDAVY- 63

  Fly   179 SCDPERKNFACQAKVFEGTARPLIDTAFEGYNACLFAYGQTGSGKSYSMMGIEALDDAALDGGPP 243
              |...|.|    ::::.|.|||:|:..:|:|..:|||||||:||:|:|.|:.         |.|
Mouse    64 --DWNAKQF----ELYDETFRPLVDSVLQGFNGTIFAYGQTGTGKTYTMEGVR---------GDP 113

  Fly   244 HDEAGIIPRFCHELFRRIEAVKSQQQLQVEVEVSYFEIYNEKIHDLLSVQHAAAATGESTPIQQQ 308
             ::.|:||.....:|..|...::||.|   |..||.|||.|:|.||||                 
Mouse   114 -EKRGVIPNSFDHIFTHISRSQNQQYL---VRASYLEIYQEEIRDLLS----------------- 157

  Fly   309 QQQQRPALKVREHPIFGPYVVDLSAHSVDSYSALRNWLAVGNSQRATASTAMNDKSSRSHSIFNI 373
             :.|...|:::|.|..|.||.|||:....|...:.:.:.|||..|:..:|.||:.|||||:||.|
Mouse   158 -KDQTKRLELKERPDTGVYVKDLSSFVTKSVKEIEHVMNVGNQNRSVGATNMNEHSSRSHAIFVI 221

  Fly   374 VLNLTDLSSDDGLSSDTDSSTASSLRQTRRSKISLVDLAGSERISVSGSNGERIREGVSINKSLL 438
            .:..:::    ||..:         ...|..|::|||||||||.:.:|:.|||::|...||.||.
Mouse   222 TIECSEV----GLDGE---------NHIRVGKLNLVDLAGSERQAKTGAQGERLKEATKINLSLS 273

  Fly   439 TLGKVIAALADSRKAIANGPLGSGTPSTFVPYRESVLTWLLRENLGGNSKTVMLATISPASIHAD 503
            .||.||:||.|.:             ||.:|||:|.||.||:::||||:||||:|.:.|||.:.:
Mouse   274 ALGNVISALVDGK-------------STHIPYRDSKLTRLLQDSLGGNAKTVMVANVGPASYNVE 325

  Fly   504 ETLATLRYACKARSIVNRVKVNESPHDKIIRDLRAEVDRLKSL-------RNEYERQRRLSGNSN 561
            |||.|||||.:|::|.|:.:|||.|.|.::|:.:.|:.|||:.       |.:...:||..|.|.
Mouse   326 ETLTTLRYANRAKNIKNKPRVNEDPKDALLREFQEEIARLKAQLEKRSIGRRKRREKRREGGGSG 390

  Fly   562 NPVPRKIIIETSVDETEVEALRQQLAERERELSRAQKSWMEKLKEAEDQRKSELRVLKRRGLALE 626
            .          ..:|.|.|.     .|.|.:.......|.|:      |.|.|:           
Mouse   391 G----------GGEEEEEEG-----EEGEEDGDDKDDYWREQ------QEKLEI----------- 423

  Fly   627 LTAEQKQACLVNLTADPILSGTLFYLLPQGLVRIGRGRLPGGSSSSQPDIVLDGPLVALQHCSIE 691
                :|:|                                         ||.|..|||.:...:.
Mouse   424 ----EKRA-----------------------------------------IVEDHSLVAEEKMRLL 443

  Fly   692 HERGGKLYVIPGSEDFETYVNGELLKDRRQLFHGDRLVIGGSHYFRISNPFCSQRGKADHPVDFQ 756
            .|:..|:..:...:|     ..|:|..:.:... .:|::||.:.                 ||..
Mouse   444 KEKEKKMEDLRREKD-----AAEMLGAKIKAME-SKLLVGGKNI-----------------VDHT 485

  Fly   757 LAHQEILQKQEQQLRSELEAEKRAALTKIEQERAQHARDFEERLQCLELEQFKYKCNSEMLETER 821
            ...|:||:::.|::     ||::....:|:|:  ..:|| ||.|              |:.||  
Mouse   486 NEQQKILEQKRQEI-----AEQKRREREIQQQ--MESRD-EETL--------------ELKET-- 526

  Fly   822 QALALAQQQEHTPLRHEDAVSTPAQKSTI--LEDIQRIMLNPSEESLHKTQLMVKEATQRCRQLD 884
                      :|.|:.|..:.|...|...  |:.::..:.:..||.:.:.|              
Mouse   527 ----------YTSLQQEVDIKTKKLKKLFSKLQAVKAEIHDLQEEHIKERQ-------------- 567

  Fly   885 LPLEFRQTQTPDEFGLLRTVILILDKQRGLKAEWPTARLGVWLDLVRDN---AEQQEKLNATTIF 946
               |..|||.              :..|.||.:          .|:.:|   .|::.|:...:.|
Mouse   568 ---ELEQTQN--------------ELTRELKLK----------HLIIENFIPLEEKNKIMNRSFF 605

  Fly   947 QSVEVDWE--PLDADLNETLSDTHNSS---RIALNLSAMKDVLLN-KPLKRLLNASSSKSNTPRQ 1005
            ...|..|:  |:....|:.:.....|:   :..|:..|...:::. :|..|..|....:.:.|.:
Mouse   606 DDEEDHWKLHPITRLENQQMMKRPVSAVGYKRPLSQHARMSMMIRPEPRYRAENIMLLELDMPSR 670

  Fly  1006 TSTPSPG---SQLVHFTKRLLTYDPEEIPESQSSFTTLVQQELQIMQRSAQR 1054
            |:....|   |..|.........|.:||....|||.:...::.:...:|.::
Mouse   671 TTRDYEGPAISPKVQAALDAALQDEDEIQVDASSFESTASRKPKARPKSGRK 722

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nebNP_476817.1 KISc_KIF1A_KIF1B 119..525 CDD:276816 150/407 (37%)
KISc 120..525 CDD:214526 149/406 (37%)
Kinesin_assoc 524..657 CDD:292801 27/139 (19%)
FHA 634..740 CDD:238017 15/105 (14%)
Kif3bNP_032470.3 KISc_KIF3 8..340 CDD:276822 149/401 (37%)
Kinesin 15..340 CDD:278646 145/393 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 374..412 10/52 (19%)
Globular 580..747 29/153 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 698..747 5/25 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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