DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment neb and Kif16b

DIOPT Version :9

Sequence 1:NP_476817.1 Gene:neb / 35293 FlyBaseID:FBgn0004374 Length:1121 Species:Drosophila melanogaster
Sequence 2:XP_036014693.1 Gene:Kif16b / 16558 MGIID:1098240 Length:1908 Species:Mus musculus


Alignment Length:1116 Identity:328/1116 - (29%)
Similarity:525/1116 - (47%) Gaps:211/1116 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 PGRAKTPGTG-----------KSSC--SRTKERDSLMESCLSV--SEESNMIVAVRVRPLNALEC 135
            |....|.|:|           |:.|  ..|.|.:..:|...:|  |.|.::    ..:.:..:|.
Mouse     4 PANVSTSGSGLVGLGAACWVWKALCVFLCTTELEKWVEILAAVLFSGEKDL----EAKFIIQMEK 64

  Fly   136 TRGQVTNVVQVHGNSNELTVQAGSSADASAGVTHFFSYDQVYYSCDPERKNFACQAKVFEGTARP 200
            ::..:||          |.:..|.:.|:....|..|:||..:||.|.:..::..|..||:.....
Mouse    65 SKTTITN----------LKIPEGGTGDSGRERTKTFTYDFSFYSADTKSPDYVSQEMVFKTLGTD 119

  Fly   201 LIDTAFEGYNACLFAYGQTGSGKSYSMMGIEALDDAALDGGPPHDEAGIIPRFCHELFRRIEAVK 265
            ::.:||||||||:||||||||||||:|||         :.|    ::|:|||.|..||.||....
Mouse   120 VVKSAFEGYNACVFAYGQTGSGKSYTMMG---------NSG----DSGLIPRICEALFSRINETT 171

  Fly   266 SQQQLQVEVEVSYFEIYNEKIHDLLSVQHAAAATGESTPIQQQQQQQRPALKVREHPIFGPYVVD 330
            ...:.....||||.|||||::.|||                :::..:...|:|||||..||||.|
Mouse   172 RWDEASFRTEVSYLEIYNERVRDLL----------------RRKSSKTFNLRVREHPKEGPYVED 220

  Fly   331 LSAHSVDSYSALRNWLAVGNSQRATASTAMNDKSSRSHSIFNIVLNLTDLSSDDGLSSDTDSSTA 395
            ||.|.|.:||.:...:..||..|.||:|.|||.|||||:||.|  ..|....|..:..:|     
Mouse   221 LSKHLVQNYSDVEELMDAGNINRTTAATGMNDVSSRSHAIFTI--KFTQAKFDAEMPCET----- 278

  Fly   396 SSLRQTRRSKISLVDLAGSERISVSGSNGERIREGVSINKSLLTLGKVIAALADSRKAIANGPLG 460
                   .|||.|||||||||...:|:.|.|::||.:|||||:|||.||:||||..:..|| ||.
Mouse   279 -------VSKIHLVDLAGSERADATGATGVRLKEGGNINKSLVTLGNVISALADLSQDAAN-PLV 335

  Fly   461 SGTPSTFVPYRESVLTWLLRENLGGNSKTVMLATISPASIHADETLATLRYACKARSIVNRVKVN 525
            . ....|||||:|||||||:::|||||||:|:||||||.::..|||:|||||.:|::|:|:..:|
Mouse   336 K-KKQVFVPYRDSVLTWLLKDSLGGNSKTIMIATISPADVNYGETLSTLRYANRAKNIINKPTIN 399

  Fly   526 ESPHDKIIRDLRAEVDRLKSLRNEYERQRRLSGNSNNPVPRKIIIETSVDETEVEALRQQLAERE 590
            |..:.|:||:||||:.|||:|..:        ||       :|.:   :|.....::.::|.:.|
Mouse   400 EDANVKLIRELRAEIARLKTLLAQ--------GN-------QIAL---LDSPTALSMEEKLHQNE 446

  Fly   591 RELSRAQKSWMEKLKEAEDQRKSELRVLKRRGLALELTAEQKQACLVNLTADPILSGTLFYLLPQ 655
            ..:....|.|..|..|.::..|.:...|::.|:.:.|.:|...  |:.:..|.:.:|.:.|.|.:
Mouse   447 ARVQELTKEWTNKWNETQNILKEQTLALRKEGIGVVLDSELPH--LIGIDDDLLSTGIILYHLKE 509

  Fly   656 GLVRIGRGRLPGGSSSSQPDIVLDGPLVALQHCSIEHERGGKLYVIP--GSEDFETYVNGELLKD 718
            |...:||     ..:|::.||||.|..:..:||..|: .||.:.:||  ||   :..|||..:.|
Mouse   510 GQTYVGR-----EDASTEQDIVLHGLDLESEHCVFEN-AGGTVTLIPLRGS---QCSVNGVQIVD 565

  Fly   719 RRQLFHGDRLVIGGSHYFRISNP----FCSQRGKADHPVDFQLAHQEILQKQEQQ---------- 769
            ..||..|..:::|.::.||.::|    ...::.|:.....|.|:..::.:..|..          
Mouse   566 ATQLNQGAVILLGRTNMFRFNHPKEAAKLREKRKSGLLSSFSLSMTDLSKSCENLSAVMLYNPGL 630

  Fly   770 --------LRSELEAEKRAALTKIEQERAQHARDFEERLQC--LELEQFKYKCNSEMLETE---- 820
                    ||.|.|.::|..|.|:|.:| :...:.||:.:.  .|||:.:.:..:...|||    
Mouse   631 FPIKGPICLRLEFERQQREELEKLESKR-KLIEEMEEKQKSDKAELERMQQEVETRRKETEIVQR 694

  Fly   821 --------------------RQALALAQQQEHTPLRHEDAVSTPAQKS-----TILEDIQRIMLN 860
                                :..||..::.|...||.:..:....::.     .|.|:::::...
Mouse   695 QIRKQEESLKRRSFHIENKLKDLLAEKERFEEERLREQQGLEQQRRQEEESLFRIREELRKLQEL 759

  Fly   861 PSEESLHKTQLMVK----EATQRCRQLDLPLEFRQTQTPDEFGLLRTVILILDKQRGLKAEWPTA 921
            .|.|...|.|:..:    ...|..:...|.||.|:.:..::..:.|  :..|::|  |:....||
Mouse   760 NSHEQAEKVQIFQELDRLHQEQNAQSAKLRLEKRRLEEEEKEQVQR--VAHLEEQ--LRKRQDTA 820

  Fly   922 RLGVWLDLVRDNAE--QQEKLNATTIFQSVEVDWEPLDADLNETLSDTHNSSRIALNLSAMKDVL 984
            .|     |....|:  |:||....:|.::: :..:.:.|..:.|..|         .|...:...
Mouse   821 PL-----LCPGEAQRAQEEKRELESIREAL-LQAKEMRAGGDHTCRD---------ELERAQQYF 870

  Fly   985 LNKPLKRLLNASSSKSNTPRQTSTPSPGSQ-----LVHF-------TKRLLTYD------PEEIP 1031
            |....::|:..:|.:.:..:|....|...|     |.|.       ...|.|.|      |.::.
Mouse   871 LEFKRRQLVKLASLEKDLVQQKDLLSKEVQEEKVALEHVKCDAGGDPSFLATDDGNILGGPPDLD 935

  Fly  1032 ESQSSFTTLVQQELQIMQRSAQRLRRHCEAALLERE---NHQDNGVLAVSLQEALARMDTVLNGM 1093
            :.:::.|.|..:|.|:.    ..|:.|..|.|.|::   :..|:|||  .|...|.:::..:...
Mouse   936 KIKTAETRLQSREHQLQ----DLLQNHLPALLEEKQRVLDALDSGVL--GLDTTLCQVEKEVGEK 994

  Fly  1094 HTSLARAEATA 1104
            ...:|:.:|.|
Mouse   995 EEQIAQYQANA 1005

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nebNP_476817.1 KISc_KIF1A_KIF1B 119..525 CDD:276816 170/405 (42%)
KISc 120..525 CDD:214526 170/404 (42%)
Kinesin_assoc 524..657 CDD:292801 33/132 (25%)
FHA 634..740 CDD:238017 33/107 (31%)
Kif16bXP_036014693.1 KISc_KIF1A_KIF1B 51..399 CDD:276816 171/406 (42%)
Kinesin_assoc 398..510 CDD:406567 33/131 (25%)
FHA 512..577 CDD:395400 24/73 (33%)
SbcC <644..1081 CDD:223496 77/388 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0245
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D123768at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.