DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment neb and Kif13a

DIOPT Version :9

Sequence 1:NP_476817.1 Gene:neb / 35293 FlyBaseID:FBgn0004374 Length:1121 Species:Drosophila melanogaster
Sequence 2:XP_036013758.1 Gene:Kif13a / 16553 MGIID:1098264 Length:1840 Species:Mus musculus


Alignment Length:1127 Identity:331/1127 - (29%)
Similarity:504/1127 - (44%) Gaps:266/1127 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 ESNMIVAVRVRPLNALE------CTRGQVTNVVQVHGNSNELTVQAGSSADASAGVTHFFSYDQV 176
            ::.:.|||||||:|..|      |       ||::.||...|.....::..........|::|..
Mouse     3 DTKVKVAVRVRPMNRRELELNTKC-------VVEMEGNQTVLHPPPSNTKQGERKPPKVFAFDYC 60

  Fly   177 YYSCDPER-KNFACQAKVFEGTARPLIDTAFEGYNACLFAYGQTGSGKSYSMMGIEALDDAALDG 240
            ::|.|... ..:|.|..||:.....:::.||:|||||:|||||||||||:||||           
Mouse    61 FWSMDESNTTKYAGQEVVFKCLGEGILEKAFQGYNACIFAYGQTGSGKSFSMMG----------- 114

  Fly   241 GPPH-DEAGIIPRFCHELFRRIEAVKSQQQLQVEVEVSYFEIYNEKIHDLLSVQHAAAATGESTP 304
               | ::.|:|||.|..||:|| |::..:....:|||||.||||||:.|||              
Mouse   115 ---HAEQLGLIPRLCCALFQRI-ALEQNESQTFKVEVSYMEIYNEKVRDLL-------------- 161

  Fly   305 IQQQQQQQRPALKVREHPIFGPYVVDLSAHSVDSYSALRNWLAVGNSQRATASTAMNDKSSRSHS 369
               ..:..|.:||||||.:.||||..||..:|.|:..:.:.::.||..|..|:|.||::|||||:
Mouse   162 ---DPKGSRQSLKVREHKVLGPYVDGLSQLAVTSFEDIESLMSEGNKSRTVAATNMNEESSRSHA 223

  Fly   370 IFNIVLNLTDLSSDDGLSSDTDSSTASSLRQTRRSKISLVDLAGSERISVSGSNGERIREGVSIN 434
            :|||::..|......|.|.:            :.||:||||||||||:|.:|:.|||::||.:||
Mouse   224 VFNIIITQTLYDLQSGNSGE------------KVSKVSLVDLAGSERVSKTGAAGERLKEGSNIN 276

  Fly   435 KSLLTLGKVIAALADSRKAIANGPLGSGTPSTFVPYRESVLTWLLRENLGGNSKTVMLATISPAS 499
            |||.|||.||::|||.       ..|.| .:.|||||:|||||||::||||||:|.|:||||||:
Mouse   277 KSLTTLGLVISSLADQ-------AAGKG-KNKFVPYRDSVLTWLLKDNLGGNSQTSMIATISPAA 333

  Fly   500 IHADETLATLRYACKARSIVNRVKVNESPHDKIIRDLRAEVDRLKSLRNEYERQRRLSGNSNNPV 564
            .:.:|||:|||||.:|:.|||...|||.|:.|:||:||.||::|:...::.|..:          
Mouse   334 DNYEETLSTLRYADRAKRIVNHAVVNEDPNAKVIRELREEVEKLREQLSQAEAMK---------- 388

  Fly   565 PRKIIIETSVDETEVEALRQQLAERERELSRAQKSWMEKLKEAEDQRKSELRVLKRRGLALE--- 626
                          ...|:::|.|.|:.:.....:|.|||::.|...:...|.|:..|::||   
Mouse   389 --------------APELKEKLEESEKLIKELTVTWEEKLRKTEAIAQERQRQLESMGISLETSG 439

  Fly   627 LTAEQKQACLVNLTADPILSGTLFYLLPQGLVRIGRGRLPGGSSSSQPDIVLDGPLVALQHCSIE 691
            :.....:..||||.|||.|:..|.|.| :...|:       |:.:|| ||.|.|..:..:||.|:
Mouse   440 IKVGDDKCYLVNLNADPALNELLVYYL-KDHTRV-------GADTSQ-DIQLFGIGIQPEHCEID 495

  Fly   692 HERGGKLYVIPGSEDFETYVNGELLKDRRQLFHGDRLVIGGSHYFRISNP----------FCSQR 746
            ....|.:.:.| .|:..:.|||.|:....||:||||::.|.:|:|||:.|          |..:.
Mouse   496 IAADGDITLTP-KENARSCVNGTLVCSTTQLWHGDRILWGNNHFFRINLPKRKRRDWLKDFERET 559

  Fly   747 GKADHPVD------------FQLAHQEILQKQ--------------------------------- 766
            ..|:|.:|            ::.|..|::.|.                                 
Mouse   560 SSAEHDLDAASEASSEPDYNYEFAQMEVIMKTLNSNGGFPIVSLSAWWSSPWWSYLKILFPLLWF 624

  Fly   767 -----------------EQQLRSELEAEKRAALTKIEQERAQHARDFEERLQCLELEQFKYKCNS 814
                             .|.|..:...|||.||   |::|..:.|:.|:..|.|..|:......|
Mouse   625 QTKLVHQHWERDPVQNVVQVLEKQYLEEKRTAL---EEQRLMYERELEQLRQQLSPERQPPSSAS 686

  Fly   815 EMLETERQALALAQQQEHTPLRHEDAVSTPAQKSTILEDIQRIMLNPSEESLHKTQLMVKEATQR 879
            :.|....|.   |||:          |:..|::.   :::.|..|....|.|.|...:|:||...
Mouse   687 DRLAYSSQT---AQQK----------VTQWAEER---DELFRQSLAKLREQLVKANTLVREANFL 735

  Fly   880 CRQLDLPLEFRQT-QTPDEFGLLRTVILILDKQRGLKAEWP---TARLG----VWLDLVRDNAEQ 936
            ..::....:::.| |.|       ...|..:::||.....|   ..|.|    ||         .
Mouse   736 AEEMSKLTDYQVTLQIP-------AANLSANRKRGAIVSEPAIQARRKGKGTQVW---------T 784

  Fly   937 QEKL-NATTIFQSVEVDWE---PLDADLNETLSDTHNSSRIALNLSAMKDVLL-----NKPLKRL 992
            .||| |.....:.:..:|:   |....|.....|....::...||..:.:|.|     :..|:..
Mouse   785 IEKLENKLIDMRDLYQEWKENVPEAKRLYGKRGDPFYEAQENHNLIGVANVFLECLFCDVKLQYA 849

  Fly   993 LNASSSKSNTPRQTSTPSPGSQLVHFTKRLLTYDPEEIPESQSSFTTLVQQELQIMQRSAQRLRR 1057
            :...|.:...        .|...|..| |:....||.:.|..||..:.....|:::..|.:.:.|
Mouse   850 VPIISQQGEV--------AGRLHVEVT-RITGTIPERMAEDDSSENSSESGSLEVVDSSGEVIHR 905

  Fly  1058 ----HCEAALLERENHQDNGVLAVSLQEALARMDTVLNGMHTSLARAEATACVTSP--------- 1109
                .|...:.|...      |.:||...:....|..:...:::|.......|.||         
Mouse   906 VKKLTCRVIIKEATG------LPISLSNFVFCQYTFWDQCESTVAAPVVDPDVPSPQSKDAQYTV 964

  Fly  1110 ----------TKTQKAVRFLID 1121
                      |.|::.:.|:.|
Mouse   965 TFSHCKDYVVTVTEEFLEFISD 986

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nebNP_476817.1 KISc_KIF1A_KIF1B 119..525 CDD:276816 175/413 (42%)
KISc 120..525 CDD:214526 175/412 (42%)
Kinesin_assoc 524..657 CDD:292801 38/135 (28%)
FHA 634..740 CDD:238017 40/105 (38%)
Kif13aXP_036013758.1 KISc_KIF1A_KIF1B 5..359 CDD:276816 175/412 (42%)
Kinesin_assoc 356..468 CDD:406567 38/136 (28%)
FHA 446..543 CDD:238017 40/106 (38%)
Smc <646..811 CDD:224117 45/199 (23%)
KIF1B 788..832 CDD:403579 8/43 (19%)
DUF3694 <1255..1319 CDD:403614
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D76316at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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