DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment neb and kif28

DIOPT Version :9

Sequence 1:NP_476817.1 Gene:neb / 35293 FlyBaseID:FBgn0004374 Length:1121 Species:Drosophila melanogaster
Sequence 2:XP_021322979.1 Gene:kif28 / 100537112 ZFINID:ZDB-GENE-130530-1027 Length:1037 Species:Danio rerio


Alignment Length:1130 Identity:297/1130 - (26%)
Similarity:454/1130 - (40%) Gaps:321/1130 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 RTKERDSLMESCLSVSEESNMIVAVRVRPLNALECTRGQVTNVVQVHGNSNELTVQAGSSADASA 165
            |.|..:...:.|:.        |||||||.|..|...|....:..   .||.:::|...::..| 
Zfish     2 RAKASEMASKDCVK--------VAVRVRPFNKRERDAGSRCIISM---TSNSISIQDPRNSQNS- 54

  Fly   166 GVTHFFSYDQVYYSCDPERKN-------------FACQAKVFEGTARPLIDTAFEGYNACLFAYG 217
               ..|::|..|:|.....:|             :|.||.||....:.::|.|.:||||.|.|||
Zfish    55 ---RTFTFDYTYWSHSGFSRNKDGLFVPEETGGRYADQASVFLDLGQGILDNALQGYNATLLAYG 116

  Fly   218 QTGSGKSYSMMGIEALDDAALDGGPPHDEAGIIPRFCHELFRRIEAVKSQQQLQVEVEVSYFEIY 282
            ||||||||||:|.          ||   ..|:||..|..||:.|.:::..:|.|  |..|..|||
Zfish   117 QTGSGKSYSMVGY----------GP---NKGLIPTLCQRLFQSIRSMQDSRQCQ--VFFSMLEIY 166

  Fly   283 NEKIHDLLSVQHAAAATGESTPIQQQQQQQRPALKVREHPIFGPYVVDLSAHSVDSYSALRNWLA 347
            ||::.||||....:|.                .|:|||....|.||..|.....||...:...:.
Zfish   167 NEQVVDLLSKSSRSAG----------------GLRVREDQQTGFYVEGLRRVPCDSALQVEQLME 215

  Fly   348 VGNSQRATASTAMNDKSSRSHSIFNIVLNLTDLSSDDGLSSDTDSSTASSLRQTRRSKISLVDLA 412
            .|...|.||:|.:|:.|||||.:  |::.|..:.|.:.:              |::|.|.|||||
Zfish   216 QGTRTRTTAATHINNSSSRSHML--IIVQLKQIFSKECI--------------TKQSNIYLVDLA 264

  Fly   413 GSERISVSGSNGERIREGVSINKSLLTLGKVIAALADSRKAIANGPLGSGTPSTFVPYRESVLTW 477
            ||||...|||.|:|::||.:||.||.|||.||:||||.       .||.   ..::|||:||||.
Zfish   265 GSERQRSSGSEGDRLKEGTAINLSLTTLGNVISALADM-------ALGK---KIYIPYRDSVLTK 319

  Fly   478 LLRENLGGNSKTVMLATISPASIHADETLATLRYACKARSIVNRVKVNESPHDKIIRDLRAE--- 539
            ||:..|||||:|||:||:|||.|..:|:|:|||||.:|:.|.|:..|||||.::::::|:||   
Zfish   320 LLQSALGGNSRTVMIATLSPADICYEESLSTLRYAERAKKIQNKAVVNESPTERLVKELKAENAK 384

  Fly   540 -VDRLKSLRNEYERQRRLSGNSNNPVPRKIIIETSVDETEVEALRQQLAERERELSRAQKSWMEK 603
             :.||..|..|..:.                      |.|.:.||:.|...|.::...|..|.:.
Zfish   385 LLLRLSRLGQEGRKA----------------------EDESKELRRLLTHNELQIRAIQTLWEQH 427

  Fly   604 LKEA-EDQRKSELRVLKRRGLALELTAEQKQACLVNLTADPILSGTLFYLLPQGLVRIGRGRLPG 667
            |:|| :|.......:.:.|.:.      |....::|:..|..||..:...:.:|...||.     
Zfish   428 LQEALKDWETQYATITQERRMM------QMYPYIMNVNEDAQLSSVVKLFIQEGEWDIGL----- 481

  Fly   668 GSSSSQPDIVLDGPLVALQHCSIEHERGGKLYVIPGSEDFETYVNGELLKDRRQLFHGDRLVIG- 731
             :.:|...:.:.|..:..:|....::: .::.:.|.| ..:..|||..:..|.:|.|.||||:| 
Zfish   482 -ADNSPRALSIRGLGIQEKHAVFSNQQ-RRVSITPVS-GAKVIVNGLQVSKRTELQHLDRLVLGS 543

  Fly   732 GSHYFRISNP------------------------------FCSQRGKADHPVDFQLA---HQEI- 762
            .|.|..|..|                              .|..:|...|..|..|.   :..| 
Zfish   544 NSTYLFIGFPSERSAEDWSRYDYDYFQSELAAAEGFHIQSLCDDQGHRPHQPDPSLLAVFYDYIK 608

  Fly   763 ---LQKQEQQLRSELEAEKRAALTKIE------QERAQH--ARDFEERLQCLELEQF----KYK- 811
               :..:..|:.:||   |:....|:|      .:...|  .:|...::..:|.:|.    |.| 
Zfish   609 LMPMVTEANQMSAEL---KKGVEFKLEIKNLAMSDSKGHDLEKDIAVKVTSVESKQVWMWSKAKF 670

  Fly   812 CNSEML--ETERQALALAQQQEHTPL-RHEDAVSTP----------------AQKSTILEDIQRI 857
            .|.:.|  |..:|.:|..:..:..|| |..|....|                |.:..:.|.::.:
Zfish   671 INRKFLMEEVYQQQVAGGEGADRAPLPRDRDPFWDPLEPLHLGSAHLWLQSLAFRIPLEEQVEMV 735

  Fly   858 MLNPSEESLHKTQLM----------------------------------------VKEATQR--- 879
            ....:||::.:.||:                                        ||||..|   
Zfish   736 GPEGTEEAILQAQLVPCSPAGLALGEDDILIDPSELLGKRLDFQLVLDQCCGLRWVKEARNRGVQ 800

  Fly   880 -------CRQ--------------LDLPLEFRQTQTPDE--------------FGLLRTVILILD 909
                   |.|              ||..::|...:|..:              :||......:|.
Zfish   801 IGFQVFDCPQPLYTPAVWHNVNPLLDHRVQFTALRTSQDLLNYLQSNALVLELWGLQEGCSELLS 865

  Fly   910 KQRGLKAEWPTARLGVWLDLVRDNAEQQEKLNATTIFQSVEVDWEPLDADLNETLSDTHNSSRIA 974
            ...|:|.....:       ::.|.....|.|.|.|....:......|..||::..:         
Zfish   866 NMDGMKMTQEDS-------VIIDKISASEHLTAETGSSDLSSSLRALHQDLDKLRN--------- 914

  Fly   975 LNLSAMKDVLLNKPLKRLLNASSS--KSNTPRQ----TSTPSPGSQLVHFTKRLLTYDPEEIPES 1033
            .|.:..|:   |..|:..||:|.:  ::|..||    :..||..::   |.|.|..:        
Zfish   915 ANAALKKE---NSALREQLNSSRNGVENNRGRQERRGSLRPSCDAE---FAKALKVF-------- 965

  Fly  1034 QSSFTTLVQQELQIMQRSAQRLRRH 1058
            ..|.|::..|        .||||||
Zfish   966 YHSMTSVRGQ--------LQRLRRH 982

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nebNP_476817.1 KISc_KIF1A_KIF1B 119..525 CDD:276816 159/418 (38%)
KISc 120..525 CDD:214526 159/417 (38%)
Kinesin_assoc 524..657 CDD:292801 30/137 (22%)
FHA 634..740 CDD:238017 26/106 (25%)
kif28XP_021322979.1 Motor_domain 14..367 CDD:328930 159/424 (38%)
FHA 453..551 CDD:238017 25/105 (24%)
KIF1B 670..708 CDD:315155 10/37 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D123768at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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