DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment neb and LOC100490836

DIOPT Version :9

Sequence 1:NP_476817.1 Gene:neb / 35293 FlyBaseID:FBgn0004374 Length:1121 Species:Drosophila melanogaster
Sequence 2:XP_002939901.2 Gene:LOC100490836 / 100490836 -ID:- Length:687 Species:Xenopus tropicalis


Alignment Length:809 Identity:261/809 - (32%)
Similarity:396/809 - (48%) Gaps:174/809 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 SNMIVAVRVRPLNALECTRGQVTNVVQVHGNSNELTVQAGSSADASAGVTHFFSYDQVYYSC-DP 182
            ||:.|||||||:|..|..:..|. |:.:..|...|..:|.|..:....... |::|..::|. |.
 Frog     2 SNVRVAVRVRPMNQREKEKHSVC-VISMSQNKTILQSKAVSPGEVQKAPKE-FTFDHCFWSADDS 64

  Fly   183 ERKNFACQAKVFEGTARPLIDTAFEGYNACLFAYGQTGSGKSYSMMGIEALDDAALDGGPPHDEA 247
            :...:|.|.:||:......|:..::|||.|:||||||||||:|||||.:             ||.
 Frog    65 DPDTYAGQEEVFKTLEEGTIENIYQGYNVCIFAYGQTGSGKTYSMMGTD-------------DEP 116

  Fly   248 GIIPRFCHELFRRIEAVKSQQQLQVEVEVSYFEIYNEKIHDLLSVQHAAAATGESTPIQQQQQQQ 312
            |:|||||..|..|    ||:.  .|.||:||.||||||:.|||.:                 ::.
 Frog   117 GLIPRFCRALLNR----KSEG--TVRVELSYMEIYNEKVRDLLDL-----------------KKS 158

  Fly   313 RPALKVREHPIFGPYVVDLSAHSVDSYSALRNWLAVGNSQRATASTAMNDKSSRSHSIFNIVLNL 377
            :..|.||||.|.||||..||.|:|.::..::..|..||..|.||:|.||::|||||:||  .|.:
 Frog   159 KKELSVREHNILGPYVEGLSQHAVSTWEDIKLLLLAGNKCRTTAATKMNEESSRSHAIF--TLTI 221

  Fly   378 TDLSSDDGLSSDTDSSTASSLRQTRRSKISLVDLAGSERISVSGSNGERIREGVSINKSLLTLGK 442
            |.:..:.      :|.|:..|    .||.:||||||||:.|.:|:.|:::.|..:|||||.:||:
 Frog   222 TQMFPNH------ESGTSKEL----HSKFNLVDLAGSEKASKTGAQGKQLVESGNINKSLTSLGR 276

  Fly   443 VIAALADSRKAIANGPLGSGTPSTFVPYRESVLTWLLRENLGGNSKTVMLATISPASIHADETLA 507
            :|::|.:.:             .::|.||||||||||:.:||||||||||||||||..:..||.:
 Frog   277 IISSLTECK-------------GSYVSYRESVLTWLLKNSLGGNSKTVMLATISPAEDNYGETHS 328

  Fly   508 TLRYACKARSIVNRVKVNESPHDKIIRDLRAEVDRLKSLRNEYERQRRLSGNSNNPVPRKIIIET 572
            ||.||.:.|.|||:.||||....|.:..|:.||.:||       .|.:.:.:..:|         
 Frog   329 TLVYAERTRQIVNQAKVNEDTKCKAVATLQEEVQKLK-------EQLKHAKSQQSP--------- 377

  Fly   573 SVDETEVEALRQQLAERERELSRAQKSWMEKLKEAEDQRKSELRVLKRRGLALE---LTAEQKQA 634
                    .|:.:|.|.|..|.:...||.||||:.|:..|...:.|:..|::::   :...::|.
 Frog   378 --------ELQSKLKESENLLKQLNLSWEEKLKKTEENAKVMQKYLESMGISVDASGIKCAKEQC 434

  Fly   635 CLVNLTADPILSGTLFYLLPQGLVRIGRGRLPGGSSSSQPDIVLDGPLVALQHCSIEHERGGKLY 699
            |||||..||..:..|.|.|.:      ..::..|||.   |..|.||.:..:||.|.....|.::
 Frog   435 CLVNLNPDPESNDYLLYYLTE------HNKIGAGSSQ---DFQLTGPGIEEEHCVITMTPDGDVF 490

  Fly   700 VIPGSEDFETYVNGELLKDRRQLFHGDRLVIGGSHYFRIS------------------------- 739
            ::|.:: .||.|||.|:::|.:|:|.|::.:|.::.|.::                         
 Frog   491 LVPNTK-AETKVNGALVQERIRLYHEDKINLGLNYSFILNQSKKRQPNSLSENKHEVEMNEMSSD 554

  Fly   740 -----------NPFCSQRGKADHPVDFQLAHQEILQKQEQQLRSELEAEKRAALTKIEQERAQHA 793
                       ||:....|..|...:....|   :..:::::.:|..:....:.:.||:..|.. 
 Frog   555 HKNKDESNPKQNPYYLLSGSQDDDTELTKTH---INPKKEEISTESRSHDSFSTSSIEKVLAIP- 615

  Fly   794 RDFEERLQCLELEQFKYKCNSEMLETERQALALAQQQEHTPLRH-EDAVSTPAQKSTILEDIQRI 857
               :|.|  |||:|     |...|..:.|:..|..||:...|.: ||.|   .:..|:|      
 Frog   616 ---QESL--LELQQ-----NFTNLVKKLQSKQLITQQDSAGLENTEDMV---LKSKTLL------ 661

  Fly   858 MLNPSEESLHKTQLMVKEATQRCRQ-LDL 885
                        .|:.::....|.| |||
 Frog   662 ------------TLIAEKGENACTQFLDL 678

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nebNP_476817.1 KISc_KIF1A_KIF1B 119..525 CDD:276816 167/406 (41%)
KISc 120..525 CDD:214526 166/405 (41%)
Kinesin_assoc 524..657 CDD:292801 37/135 (27%)
FHA 634..740 CDD:238017 34/141 (24%)
LOC100490836XP_002939901.2 Motor_domain 2..346 CDD:354959 167/406 (41%)
Kinesin_assoc <376..455 CDD:374417 27/95 (28%)
FHA 458..520 CDD:366133 22/65 (34%)
DD 622..679 CDD:387368 20/83 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D76316at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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