DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment neb and kif16b

DIOPT Version :10

Sequence 1:NP_476817.1 Gene:neb / 35293 FlyBaseID:FBgn0004374 Length:1121 Species:Drosophila melanogaster
Sequence 2:XP_012819297.1 Gene:kif16b / 100489716 XenbaseID:XB-GENE-948787 Length:1837 Species:Xenopus tropicalis


Alignment Length:1025 Identity:322/1025 - (31%)
Similarity:503/1025 - (49%) Gaps:182/1025 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 VAVRVRPLNALECTRGQVTNVVQVHGNSNELT---VQAGSSADASAGVTHFFSYDQVYYSCDPER 184
            |||||||:|..|... :...::::.|....:|   :..|.|.|.....|..|:||..|:|.|.:.
 Frog     6 VAVRVRPMNRREKDL-EAKFIIEMEGKKTTITNIKMPDGISGDLGRERTKTFTYDFSYFSVDSKN 69

  Fly   185 KNFACQAKVFEGTARPLIDTAFEGYNACLFAYGQTGSGKSYSMMGIEALDDAALDGGPPHDEAGI 249
            .::|.|.:||:.....::.:||||||||:||||||||||||:||            |.|.| :|:
 Frog    70 IDYASQERVFKDLGTDVLQSAFEGYNACIFAYGQTGSGKSYTMM------------GNPGD-SGL 121

  Fly   250 IPRFCHELFRRIEAVKSQQQLQVEVEVSYFEIYNEKIHDLLSVQHAAAATGESTPIQQQQQQQRP 314
            |||.|..||.||.............||||.|||||::.|||                :::..:..
 Frog   122 IPRICEGLFSRIAETTRWGDASFRTEVSYLEIYNERVRDLL----------------RRKSSKTF 170

  Fly   315 ALKVREHPIFGPYVVDLSAHSVDSYSALRNWLAVGNSQRATASTAMNDKSSRSHSIFNIVLNLTD 379
            .|:|||||..||||.|||.|.|.:|..:...:..||..|.||:|.|||.|||||:||.|  |.|.
 Frog   171 NLRVREHPKEGPYVEDLSKHLVQNYGDVEELMDAGNINRTTAATGMNDVSSRSHAIFTI--NFTQ 233

  Fly   380 LSSDDGLSSDTDSSTASSLRQTRRSKISLVDLAGSERISVSGSNGERIREGVSINKSLLTLGKVI 444
            ...|..:..:|            .|||.|||||||||...:|:.|.|::||.:|||||:|||.||
 Frog   234 AKFDAEMPCET------------VSKIHLVDLAGSERADATGATGVRLKEGGNINKSLVTLGNVI 286

  Fly   445 AALADSRKAIANGPLGSGTPSTFVPYRESVLTWLLRENLGGNSKTVMLATISPASIHADETLATL 509
            :||||..:..||..  :.....|||||:|||||||:::|||||||:|:||||||.|:..|||:||
 Frog   287 SALADLSQDAANHL--AKKKQVFVPYRDSVLTWLLKDSLGGNSKTIMIATISPADINYGETLSTL 349

  Fly   510 RYACKARSIVNRVKVNESPHDKIIRDLRAEVDRLKSLRNEYERQRRLSGNSNNPVPRKIIIETSV 574
            |||.:|::|:|:..:||..:.|:||:||||:.|||:|..:        ||       :|.:   :
 Frog   350 RYANRAKNIINKPTINEDANVKLIRELRAEIARLKALLAQ--------GN-------QIAL---L 396

  Fly   575 DETEVEALRQQLAERERELSRAQKSWMEKLKEAEDQRKSELRVLKRRGLALELTAEQKQACLVNL 639
            |.....::.::|.:.|..:....|.|..|..|.::..|.:...|::.|:.:.|.:|...  |:.:
 Frog   397 DSPTALSMEEKLQQNEARVEELTKEWTNKWNETQNILKEQTLALRKEGIGVVLDSELPH--LIGI 459

  Fly   640 TADPILSGTLFYLLPQGLVRIGRGRLPGGSSSSQPDIVLDGPLVALQHCSIEHERGGKLYVIP-- 702
            ..|.:.:|.:.|.|.:|...:||     ..:::..||||.|..:..:||..|: ..|.:.:||  
 Frog   460 DDDLLSTGIILYHLKEGRTYVGR-----EDAAADQDIVLHGLDLESEHCIFEN-LSGTVTLIPLN 518

  Fly   703 GSEDFETYVNGELLKDRRQLFHGDRLVIGGSHYFRISNP----FCSQRGKADHPVDFQLAHQEIL 763
            ||   :..|||..:::..||..|..:::|.::.||.::|    ...::.|:.....|.|:..: |
 Frog   519 GS---QCSVNGVQIQESTQLNQGAVILLGRTNMFRFNHPKEAAKLREKRKSGLLSSFSLSMTD-L 579

  Fly   764 QKQEQQLRS--------ELEAEKRAALTKIEQERAQHARDFEE--RLQCLELEQFKYKCNSEMLE 818
            .|..:.|.:        |.|.::|..|.|:|.:| :..::.||  :.:..|||:.:.:..|:..|
 Frog   580 SKSCENLSAVMLYNPGLEFERQQREELEKLENKR-KLIKEMEEKQKYEKAELEKMQQEVESQRKE 643

  Fly   819 TERQALALAQQQEHTPLRHEDAVSTPAQKSTILEDIQRIMLNPSEESLHKTQ------------- 870
            ||...|.:.:|:|....|..|..|.       |:|:....:...||.|.:.|             
 Frog   644 TEIVQLHIRKQEESLKRRSLDIESR-------LQDLLAEKIKFEEERLREQQEIELQKKKQQEES 701

  Fly   871 -LMVKEATQRCRQLDLPLEFRQTQTPDEFGLLRTVILILDKQRGLKAEWPTARLGVWLDLVRDNA 934
             :.|:|..||.::|      ..|:..::..:.|.    |:|   ||.|.....|.  |:..:...
 Frog   702 FIKVQEELQRLQEL------HNTEKGEKMEIFRE----LEK---LKKEKDDQYLK--LEAEKKRL 751

  Fly   935 EQQEKLNATTIFQSVEVDWEPLDADLNE-----TLSDTHNSSRIALNLSAMKDVLLNKPLKRLLN 994
            |:||:.....:|:        |:..|.|     .|.:..:.||:...:..::||     .:.||.
 Frog   752 EEQEREQLKLVFR--------LEEQLREKQEMILLFERGDVSRLEEEIGVLEDV-----REDLLR 803

  Fly   995 ASSSKSNTPRQTSTPSPGSQLVHFTKRLLTYDPEEIPESQSSFTTLVQQELQIMQRSAQRLRRHC 1059
            |..::|.        ..|             ||||:.::.:.:|..  :.:|:.:.|......|.
 Frog   804 AKEARSE--------GEG-------------DPEEVEKATNKYTEF--KRMQVDKLSVLEGDLHR 845

  Fly  1060 EAALLERENHQDNGVLAVSLQEALARMDTVLNGMHTSLARAEATACVTSP 1109
            :...||:|...|:        :.|:|: .:.|..:|.|.:.|..:.:.:|
 Frog   846 QTDCLEKEIKADH--------DTLSRL-CLSNVENTELHKTEDESSLVTP 886

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nebNP_476817.1 KISc_KIF1A_KIF1B 119..525 CDD:276816 179/404 (44%)
SMC_N 514..>615 CDD:481474 27/100 (27%)
FHA_KIF14 627..741 CDD:438759 32/115 (28%)
kif16bXP_012819297.1 KISc_KIF1A_KIF1B 2..365 CDD:276816 179/404 (44%)
Kinesin_assoc 364..476 CDD:465047 33/131 (25%)
FHA_KIF16B 446..562 CDD:438784 33/126 (26%)
Smc <600..>1077 CDD:440809 76/355 (21%)

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