Sequence 1: | NP_610019.2 | Gene: | vls / 35289 | FlyBaseID: | FBgn0003978 | Length: | 367 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038958345.1 | Gene: | Wdr77 / 310769 | RGDID: | 1310479 | Length: | 348 | Species: | Rattus norvegicus |
Alignment Length: | 372 | Identity: | 85/372 - (22%) |
---|---|---|---|
Similarity: | 141/372 - (37%) | Gaps: | 67/372 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 18 PPPALELAGNLEYPNLNIADLNARLENLSPRLHDCW----DSIAINDHNHLALATNRREGRQWWG 78
Fly 79 MLFGYGRDQMHHMSVDSANFKLQAEHTVNIVRYAEDDFLLVALGDTRLQAWSTYSKVRDSQSPYC 143
Fly 144 LFLVGESSAHPTPISQLSVFKADPRTAVSGSADSTLNVWDLSGADMVSTYRSRSSHTDKLTGLAT 208
Fly 209 PAASVDKFVTCDRGGCARLWDVRAAAPSST--------CLYADASHVLSFTSAAW-AAASELQGD 264
Fly 265 NHIYLGDYDGKVHTLDIR--------VPRKLAETREYFDKGHVAQLLINGPHLAAMSNLPASVKV 321
Fly 322 ANVQAGHEFIYTHQDTHSRLTDAVWT--DDSTLITIGHGRKMVTHAI 366 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
vls | NP_610019.2 | WD40 | 106..>282 | CDD:295369 | 48/184 (26%) |
WD40 | <134..>358 | CDD:225201 | 58/242 (24%) | ||
WD40 repeat | 157..198 | CDD:293791 | 13/40 (33%) | ||
WD40 repeat | 204..245 | CDD:293791 | 11/48 (23%) | ||
WD40 repeat | 250..281 | CDD:293791 | 10/31 (32%) | ||
WD40 repeat | 289..335 | CDD:293791 | 9/45 (20%) | ||
Wdr77 | XP_038958345.1 | WD40 | 80..325 | CDD:421866 | 65/273 (24%) |
WD40 repeat | 129..165 | CDD:293791 | 13/39 (33%) | ||
WD40 repeat | 170..207 | CDD:293791 | 10/36 (28%) | ||
WD40 repeat | 222..256 | CDD:293791 | 11/38 (29%) | ||
WD40 repeat | 263..298 | CDD:293791 | 9/44 (20%) | ||
WD40 repeat | 306..339 | CDD:293791 | 8/28 (29%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 68 | 1.000 | Inparanoid score | I5239 |
OMA | 1 | 1.010 | - | - | QHG50221 | |
OrthoDB | 1 | 1.010 | - | - | D337178at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0007197 | |
OrthoInspector | 1 | 1.000 | - | - | oto98574 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_108117 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR46853 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
8 | 7.980 |