DRSC/TRiP Functional Genomics Resources

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Protein Alignment lok and AT1G61390

DIOPT Version :9

Sequence 1:NP_477219.1 Gene:lok / 35288 FlyBaseID:FBgn0019686 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_176334.1 Gene:AT1G61390 / 842433 AraportID:AT1G61390 Length:831 Species:Arabidopsis thaliana


Alignment Length:388 Identity:97/388 - (25%)
Similarity:155/388 - (39%) Gaps:104/388 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 NCELTNPVYIQDL--------------------SRNGTFVNNEKIGTNRMRILKNDDV-----IS 144
            ||..|...||..:                    |.:....::|..|:||.:|:....|     :.
plant   399 NCSCTAFAYISGIGCLVWNRELVDTVQFLSDGESLSLRLASSELAGSNRTKIILGTTVSLSIFVI 463

  Fly   145 LSHPTYKAFVF--------------------KDLSPNESIGLP-------EEINKTYYVNRKLGS 182
            |....||::.:                    ||:.|.:..|:.       ......:..:.|||.
plant   464 LVFAAYKSWRYRTKQNEPNPMFIHSSQDAWAKDMEPQDVSGVNLFDMHTIRTATNNFSSSNKLGQ 528

  Fly   183 GAYGLV---RLVYDTRTCQQFAMKIVKKNMLSGARPSTNFSDPDRVLNEAKIMKNLSHPCVVRMH 244
            |.:|.|   :|| |.:       :|..|.:.|.:...|     |..:||.:::..|.|..:||:.
plant   529 GGFGPVYKGKLV-DGK-------EIAVKRLSSSSGQGT-----DEFMNEIRLISKLQHKNLVRLL 580

  Fly   245 DIVDKPDSVYMVLEFMRGGDLLNRIISNKLLSE-DISKLY--FYQMCHAVKYLHDRG---ITHRD 303
            ....|.:...::.|::....|...:..:.|..| |..|.:  ...:...:.|||...   :.|||
plant   581 GCCIKGEEKLLIYEYLVNKSLDVFLFDSTLKFEIDWQKRFNIIQGVARGLLYLHRDSRLRVIHRD 645

  Fly   304 LKPDNVLLETNDEETLLKVSDFGLSKFVQ----KDSVMRTLCGTPLYVAPEVLITGGREAYTKKV 364
            ||..|:||   ||:.:.|:|||||::..|    :|:..|.: ||..|:|||...||   .:::|.
plant   646 LKVSNILL---DEKMIPKISDFGLARMSQGTQYQDNTRRVV-GTLGYMAPEYAWTG---VFSEKS 703

  Fly   365 DIWSLGVVLFTCLSG--TLPFSDEYGTPAAQQIKKGRFAYGHPSW---KSVSQRAKLLINQML 422
            ||:|.||:|...:.|  ...||:|         .|...||...||   |.|.     |::|.|
plant   704 DIYSFGVLLLEIIIGEKISRFSEE---------GKTLLAYAWESWCETKGVD-----LLDQAL 752

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lokNP_477219.1 FHA 39..156 CDD:238017 15/95 (16%)
STKc_Chk2 167..441 CDD:270986 78/281 (28%)
S_TKc 174..441 CDD:214567 78/267 (29%)
AT1G61390NP_176334.1 B_lectin 47..164 CDD:214519
B_lectin 47..164 CDD:237995
S_locus_glycop 223..332 CDD:279321
PAN_AP_plant 349..438 CDD:238531 6/38 (16%)
TyrKc 525..789 CDD:197581 78/262 (30%)
STKc_IRAK 526..792 CDD:270968 77/261 (30%)
DUF3403 790..831 CDD:256698
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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