DRSC/TRiP Functional Genomics Resources

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Protein Alignment lok and PEPKR1

DIOPT Version :9

Sequence 1:NP_477219.1 Gene:lok / 35288 FlyBaseID:FBgn0019686 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_172719.1 Gene:PEPKR1 / 837815 AraportID:AT1G12580 Length:522 Species:Arabidopsis thaliana


Alignment Length:312 Identity:98/312 - (31%)
Similarity:162/312 - (51%) Gaps:16/312 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 FKDLSPNESIGLPEEINK---TYYVNRKLGSGAYGLVRLVYDTRTCQQFAMKIVKKNMLSGARPS 216
            :|..|..|:|..|..::.   .|.:..:||.|.:|::|:..|..|.::.|.|.:.|:.|      
plant    22 YKVASLTETILNPVNVSNLKDRYVLGEQLGWGQFGVIRVCSDKLTGERLACKSISKDRL------ 80

  Fly   217 TNFSDPDRVLNEAKIMKNLS-HPCVVRMHDIVDKPDSVYMVLEFMRGGDLLNRIISNKLLSEDIS 280
            ....|...:..|..||..|: ||.||.:..:.::.|||::|:|...||:|.:::......||..:
plant    81 VTQDDMKSIKLEIAIMAKLAGHPNVVNLKAVYEEKDSVHLVMELCAGGELFHKLEKYGRYSEVRA 145

  Fly   281 KLYFYQMCHAVKYLHDRGITHRDLKPDNVLLETNDEETLLKVSDFGLSKFVQKDSVMRTLCGTPL 345
            ::.|..:...||:.||.||.||||||:|:|:.|....:.:|::||||:.:::....:....|:|.
plant   146 RVLFKHLMQVVKFCHDSGIVHRDLKPENILMATMSSSSPIKLADFGLATYIKPGEKLSGTVGSPF 210

  Fly   346 YVAPEVLITGGREAYTKKVDIWSLGVVLFTCLSGTLPFSDEYGTPAAQQIKKGRFAYGHPSWKSV 410
            |:|||||..|    |.:..|:||.||:|:..|||..||..:..:.....::.....:....|.::
plant   211 YIAPEVLAGG----YNQAADVWSAGVILYILLSGAPPFWGKTKSKIFDAVRAADLRFSAEPWDNI 271

  Fly   411 SQRAKLLINQMLIVDPERRPSIDDVLQSSWLRDAPMLQKAKRLMKLDGMEIE 462
            :..||.||..||.|||.:|.|.|:||..||:..  :.:..:.....||...|
plant   272 TSYAKDLIRGMLCVDPSQRLSADEVLAHSWMEQ--LSESGQEQYDQDGFGCE 321

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity